Methylomonas sp. EFPC1: JWZ98_12235
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Entry
JWZ98_12235 CDS
T10319
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meep03021
]
JWZ98_12235 (rpoS)
Transcription machinery [BR:
meep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JWZ98_12235 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF3562
DprA_WH
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QSA99471
LinkDB
All DBs
Position
complement(2617949..2618929)
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AA seq
326 aa
AA seq
DB search
MMEETIDVIKDMDIPDFISFDDVDEEVVEIDPNETFKLAEIESNESQNESTFDATRAYLN
ELSKSQLLTADEEKIYGRRTQQGDPQARKIMIESNLRLVVKISRRYLNRGLPLLDLIEEG
NLGLIRAVEKFDPDRGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKEMNIYLKAQR
NLAQQLDHEPTVDEIARHLDKPAKTVSKMLKLNERVTSVDVSFGKDFDKPLLETISEEES
RNPAEILQDDFIQNNVTYWVYQLAEKQREVICRRYGLCGFENATLEQVALELGVTRERVR
QIQMDGLKRLKEILESSGYSFESIFS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaaacgatagatgtaattaaagatatggatattccagatttcatttctttt
gatgatgtcgatgaagaagttgtcgaaatcgatccgaacgaaacctttaagctggccgaa
atagaaagtaacgaatcgcaaaatgagagtactttcgatgctacccgagcgtatctgaat
gaactcagtaaatcccaactgttaactgcggatgaagaaaaaatctacggcagacgaact
caacagggcgatccacaagcccgaaaaattatgatcgaaagcaatttacgtctggttgtg
aaaatttccaggcgttatttaaatcgcgggctccctttactcgatttaatcgaagaaggt
aatttggggctgatccgcgcagtggaaaagtttgatcctgatcgtggcttcagattttca
acctacgcaacctggtggatcaggcagaccatagagcgtgcaatcatgaatcagactaga
actattcgcctgccgattcatattgttaaagaaatgaacatttatttgaaagcgcagcgg
aatttagcgcaacagcttgatcacgagccgactgtcgacgagattgcgcggcatcttgat
aaaccggccaaaaccgtcagtaaaatgctgaaactcaacgagcgtgtcacatctgttgat
gtgtcattcggtaaggactttgacaaacccctacttgagacaatttccgaagaagaaagc
cgtaatcctgctgaaatcttgcaagacgactttatccaaaataacgtcacctactgggtc
tatcagcttgccgaaaaacagcgcgaagtcatatgccgcaggtatggtctttgcggcttt
gaaaacgccactctggaacaggtagcgctagaattgggtgtcactcgggaaagagttagg
cagatacaaatggacggtttgaagcgtctcaaagaaattcttgaaagtagtggctattcg
ttcgaatcgatttttagctaa
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