Methylomonas sp. EFPC1: JWZ98_14595
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Entry
JWZ98_14595 CDS
T10319
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep00521
Streptomycin biosynthesis
meep00523
Polyketide sugar unit biosynthesis
meep00525
Acarbose and validamycin biosynthesis
meep00541
Biosynthesis of various nucleotide sugars
meep01100
Metabolic pathways
meep01110
Biosynthesis of secondary metabolites
meep01250
Biosynthesis of nucleotide sugars
Module
meep_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWZ98_14595 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWZ98_14595 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JWZ98_14595 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWZ98_14595 (rfbB)
00525 Acarbose and validamycin biosynthesis
JWZ98_14595 (rfbB)
Enzymes [BR:
meep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JWZ98_14595 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QSA99907
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Position
complement(3151569..3152639)
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AA seq
356 aa
AA seq
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MSILVTGGAGFIGSNFVLDWLAQSDELLVNLDKLTYAGNLQNLASLHDDDRHVFVQGDIA
DYDLLLSLLQKYRIRAVINFAAESHVDRSIHGPEDFIQTNIVGSFRLLEAVRQYWNNLEQ
PAKQVFRLLHVSTDEVYGSLEKSDAPFAETNQYQPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLCIQNALSGKALPIYGDGQQIRDWLYVKDHCSAIRRVLE
SGKLGEVYNVGGWNEKANLDVVNTLCSILDELQPRSDGKSYAEQITYVTDRPGHDRRYAI
DAGKLERELGWKPAETFETGIRKTVQWYLDNQAWVSNVLSGDYQSWLDKNYAGRTA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttagtcaccggtggggccgggtttatcggcagcaattttgtattggattgg
ttggcgcaaagcgacgaattgctcgtcaatttggataaattgacctatgcgggtaactta
cagaatttggcttcgctacatgacgatgacaggcatgtatttgttcaaggtgacattgcg
gattacgatttgctgctgagtttactgcaaaagtaccggattcgggccgtgatcaatttt
gctgccgaatcacatgttgatcgttccatccacggaccggaagattttattcaaaccaat
atcgtcggcagtttccgtttgttggaagcggtacggcaatactggaacaacttggaacag
ccggccaagcaggttttccgtttactgcacgtgtctaccgacgaggtttacggttctttg
gaaaagtccgatgcgccgtttgccgaaaccaatcagtatcaacccaatagtccttattcc
gccagtaaagccgctagcgaccatttggtgcgtgcttatcaccacacttacgggttgccg
gtactgaccactaattgctccaataattacggcccttatcatttcccggaaaaactcatc
ccactgtgcattcaaaatgccttgtccggcaaagctttgccgatttatggcgacggtcaa
cagattcgcgattggttgtatgtgaaagatcattgcagtgcgattcgccgtgtgttggaa
tccggcaagcttggcgaggtttataacgtcggcggttggaacgaaaaagccaatctggat
gtagtcaacacgctatgcagtattctggatgagctgcagccgcgtagcgacggcaaatcc
tatgccgaacagattacctatgtcaccgaccggcctgggcacgacagacgttatgccatc
gatgccggcaagttggaacgggagctaggctggaaaccggcggaaacctttgagaccggc
attcgcaaaaccgtgcagtggtatttggataaccaagcctgggttagcaatgtgttgtcc
ggtgactaccagtcctggctcgataaaaactatgcagggcgcactgcgtga
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