Methylomonas sp. EFPC1: JWZ98_16190
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Entry
JWZ98_16190 CDS
T10319
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
meep Methylomonas sp. EFPC1
Brite
Enzymes [BR:
meep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JWZ98_16190 (rnd)
Transfer RNA biogenesis [BR:
meep03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JWZ98_16190 (rnd)
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NCBI-ProteinID:
QSB00210
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Position
complement(3523052..3524200)
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AA seq
382 aa
AA seq
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MTIQYINRPDQLDSLCQLISQEPWIALDTEFLREKTYYPKFCLLQIAAPGWVACVDPLAI
ADLTPLLEAIYNPNIVKVLHSCRQDLEIFYQITGKIPGPIFDTQIAAPLLGFQENPGYAM
LVSSFLNVNLSKAHTRTDWSERPLSQDQIQYAADDVIYLCKIYKIMCEQLDKLGRANWLE
SDFALLNDPELYQLSPENAWLKIRGKNKLTGKQLSIMQSLTEWRERTAQQENKPRSWLLQ
DDLLLELGKLQPVTLADLAKIRNINDRTVNRYGKTICELIDSAKQRPPKPLAEKDQAGKK
TQQHEAILDVLSAVVRIRAEENSLNPIILATRKDLEQLLSGDEDCLLLHGWRYNMAGREL
QGLLRGDLTLSLKPDGVVISAV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgactattcaatatatcaaccgcccggatcaactcgatagcctttgccaactgataagc
caggagccctggatcgccctggataccgaatttcttcgcgagaaaacctattaccccaag
ttttgtttactgcaaatagccgcgccggggtgggtggcttgtgtcgatccgttagcgatt
gccgatttaacgccactgttagaggcgatttacaatcccaatattgtcaaagtgctgcat
tcctgccggcaggatctggaaattttttaccagattaccggcaaaattccgggcccgatt
ttcgatacgcagattgccgcaccgctgctgggttttcaggaaaatccgggttatgcgatg
ctggtatccagctttttaaacgtcaatctcagcaaagcgcatacccgtaccgattggtcg
gagcggcccttgagccaggatcaaatccagtatgccgccgacgatgtaatttacctgtgc
aagatctacaaaatcatgtgcgagcaattggataagttagggcgtgcaaattggctggaa
agtgattttgccttgttgaacgatccggagctttaccaactctcgccggaaaatgcctgg
ttgaagattcgcggcaaaaacaaactgaccggcaagcaattgtccatcatgcaaagtctc
accgaatggcgcgaacgtaccgcccagcaagaaaacaaaccgcgcagttggttgttgcag
gacgatttgctgctggaactgggcaaattacaacccgtgaccttggccgatctagccaag
atccgcaacatcaacgaccgtaccgtcaatcgttacggcaaaacgatttgcgaattgatc
gacagtgccaaacaacgtccgcccaaacccttggccgaaaaggatcaagccggcaagaaa
acccaacagcacgaagcgatactggatgtactcagcgcggtggtcagaatccgtgctgag
gaaaactcgctgaatcccatcatcttggctacccgcaaggatctggagcaattactgtcc
ggcgatgaggattgcttgttgttgcacggctggcgttacaacatggccggtcgggagttg
cagggcttattgcgcggtgacttaaccttgagcttgaagccggatggcgtggtgattagt
gcggtttag
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