Methylomonas sp. EFPC1: JWZ98_16210
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Entry
JWZ98_16210 CDS
T10319
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meep02000
]
JWZ98_16210 (lptD)
Transporters [BR:
meep02000
]
Other transporters
Pores ion channels [TC:
1
]
JWZ98_16210 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
Motif
Other DBs
NCBI-ProteinID:
QSB00214
LinkDB
All DBs
Position
complement(3528613..3531438)
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AA seq
941 aa
AA seq
DB search
MNYRFYTISSALLFFTGVASAANNAAWNCEQTKNGEWTCLNQTPAGNEPTAQPQVIKPTP
PAQTKPAQPETVAQPPVPVVPAPVQQAIKPEPEPEKVKVVEKAVEKAVAEPQKLRVKVTE
NQKPVLEKVEPKTETANANTGKVPGWTCKTGDDKSGWNCNLVGADPKGEAHVVAEGGSSE
ESGSSWFTPTFDRKQERDFQTLRAEFDKDPWQSCEVWGAKKRKIRATSAEVRDAATTDIN
ADFSEVFDGEVLNFAGNVDMVRADQHLVADKASYDTVAETLDAQGSVLYSEDQLAFSSET
ASLSLGKDEARLRKAQFIVAEAPFRGNAGVVYRESKGLSRYNDAAFTSCAPGNQDWIVHA
SRMKINRDSGQGSAKNAWLEFKGVPVLYTPYISFPTDNRRLSGLLAPTWGSTQRNGFDVS
VPFYWNIAPNFDDIVTPRYMSKRGEQLRNKFRYLTDISRGTFSAEYMPNDQLVNKARYSA
SWKDQSTLLPGLNSLLDLNYVSDKTYFNDLNNALGFQNTSYLPSTALLSYGGAVAGTALG
LSVGAYHYQSVDKTIPDAAMPYDMLPRVNFNVAHAFEGLPVTLAMNNEFTHFYHTDLVNG
QRINIAPSLSLPLESSAGYFIPKITGQYTQYQLSNQTLAGQPSTISRTLPIFSVSSGMNF
EKDLNFGGSQYLHTLEPQAFYLYIPRKDQSNIPVFDTALYDTNFYSLFRENRFAGGDRIQ
DANQITLATVSRFIDSNTGLEPLKVSLGQIMYFQDRTVTMPGQPIETSNTSNFVGELSGQ
FSKHWSYMTGTQWDPEANGFARGQVALKYNMQPNQIVNLGYRYRRNPLDSLQTISQTDVS
FRLPLFGEWYGFGRWQYSLNFDKTTESFIGVERENCCWRFRILGRRFINGANTIAFIDPS
TKPETAFFVQLELKGLSSFGDNVDTFLQTNLKGYRKASYFE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcggttttatactatttcttcagcattattgttttttacgggcgtcgcctct
gctgccaataatgcggcgtggaattgtgagcaaaccaaaaatggcgaatggacttgtcta
aatcaaacacctgctggcaacgagccaactgctcagccgcaagtgattaaacccaccccg
cccgcccaaaccaagcctgcccagccggaaacagtcgcgcagccgcctgttcccgtcgtg
cccgcgccggttcagcaagcgatcaaaccggaacccgagccggaaaaagttaaggtggtt
gaaaaggcggtggaaaaagccgttgccgagccgcaaaagttacgggttaaagtgactgaa
aatcaaaaaccggtgctggaaaaagtcgagcccaaaaccgaaacagccaatgccaatacc
ggcaaagtgcccggttggacttgcaaaaccggtgatgataagagcggttggaactgtaat
ctggtgggtgccgatccgaaaggcgaggcccatgtcgtagccgaaggcggcagcagtgaa
gagtccggttcgtcttggtttacgcctacctttgatcgcaaacaagagcgggattttcaa
accttacgggccgagtttgataaagatccttggcaaagctgcgaagtgtggggtgctaaa
aaacgcaaaatcagagccacctccgccgaagtccgcgacgcagcaactaccgatattaat
gccgatttttcggaagtcttcgacggcgaagtgcttaattttgccggtaatgtggatatg
gtgcgcgcggatcagcatttggttgccgacaaggccagttacgatacggttgccgaaacc
ttggacgcacaaggtagcgtgttatacagcgaagaccagctggctttttccagcgagacc
gcctcgttgagcctgggtaaagacgaagcacgcttgcgcaaggcgcaatttatcgtcgcg
gaggcgccgtttcgcggcaacgccggggtggtttatcgcgagagtaaaggcttgtcgcgt
tataacgatgccgcgtttaccagttgtgcgccgggcaatcaggactggattgtgcatgct
tcgcggatgaaaattaaccgggacagcggacaaggttcagcgaaaaacgcctggctggaa
tttaaaggcgtaccggtgttgtacacgccttatatttccttccctaccgacaatcgccgc
ctgtcgggcctgttggcgccaacttggggtagtacgcaacggaacggttttgacgtttcc
gtgccgttttattggaatatcgcccccaacttcgacgatattgtcacgccgcgttacatg
agtaagcgtggtgagcagttacgcaataaattccgctatctgaccgatatatccagaggt
acgttttctgcggaatatatgcccaacgatcaattggtcaacaaggcccgttactcggca
agctggaaggatcaatctaccttgttgccgggtttaaattccttgttggatttgaactac
gtgtccgacaaaacctatttcaacgacttgaataatgccttgggtttccaaaataccagt
tatttgcccagtaccgcattactgagttacggcggggctgttgccggcaccgctctaggt
ttgtcggtaggggcatatcattatcaatctgtggataaaaccattcccgatgccgcgatg
ccctacgatatgctgcctcgcgtcaatttcaatgtggcgcatgcgtttgaaggtttgccg
gttacgctggcgatgaataacgagtttacccatttctatcacactgatctggttaacggt
cagcggattaatattgccccgtcactcagcttgccattggaaagtagcgccgggtatttc
atcccgaaaatcaccggccaatacacgcagtatcaattgagcaaccaaaccttagccggg
cagcccagtactattagccggaccttgccgatcttctcggttagcagcggcatgaatttc
gaaaaagaccttaatttcggtggttcgcagtatctgcacaccttggagccgcaggctttt
tacttgtatatcccgcgcaaggatcaaagcaatattccggtcttcgataccgctctgtac
gataccaatttttacagcttgttccgggaaaaccgtttcgccggtggggacaggatacag
gacgccaatcagatcacgctggccaccgtttcgcggtttatcgattccaataccggtttg
gagcctttaaaagtcagtctggggcagattatgtatttccaggacagaaccgtgacgatg
cctgggcagccgattgagaccagtaatacctccaatttcgtcggagaactgagcggccaa
ttcagcaaacattggtcgtatatgaccggtacccaatgggatccggaagccaacggcttc
gcgcgtggccaggtggcgttaaaatacaatatgcaaccgaaccagattgtgaaccttggc
tatcggtaccgtcgtaaccccttggacagcttacaaaccatctcgcaaaccgacgtatcg
ttccgcttacctttgtttggcgaatggtacggcttcggtcgctggcagtactctttgaat
ttcgataaaaccacggaaagtttcattggcgtggagcgggaaaactgttgctggcgcttc
cgtattctgggcaggcgctttatcaacggtgccaataccatcgcctttatcgatcctagc
accaagccggaaaccgcgtttttcgtacagttggaactgaaaggtctgtccagcttcggt
gacaatgtcgatacgttcctgcaaaccaacctgaaaggctatcgcaaagccagctatttt
gagtaa
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