Methylomonas sp. EFPC1: JWZ98_16280
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Entry
JWZ98_16280 CDS
T10319
Name
(GenBank) PAS domain-containing protein
Organism
meep Methylomonas sp. EFPC1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
HATPase_c
Response_reg
HisKA
PAS_9
PAS
PAS_4
GAF
PAS_8
Hpt
Diguanyl_cycl_sensor
GAF_2
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QSB00228
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All DBs
Position
3543861..3547859
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AA seq
1332 aa
AA seq
DB search
MTDKLANTANQIRRFVLVAVCLLLIGEITVVLYQNINGTSELTKILIVLLPGLAVLLIFS
ELLSNRQISSSGLTPIGDFYDHLAQSAIVVDNQGIIRHANQAAALSVGKSPAELVGQAIH
AWFHPTNHAETECPLCQHIKAGKAMPASDYAFPNQTWQQISLTRLSTQNNSELIQFHIDI
TPRKQVEEQLALVIDGAQLGYWDWNYLSGEHSVNQRWLDMLGLSHDELDNYVSDWDKRLH
PDDRQRVKQFVAKHIASDRPYVVEFRMRHKLGHWVWIQGSGAVVAYDPVSGAPSRLCGTH
QDISVRKQSEHNLQRAYQIISQSAAVVLKWNNSEGLPIEFATENARQLFGYSVEQLITGN
LFYLNLIHPDDVGVFLREIATCRNDPDCSEIAHQPYRIVAQNGGIKWVQDRKMVVRNEQG
KIIDYQGLVSDITQQRQQSSVIRNIVSSNLPQSAASLLDNLTLLTVETLGADFALIAETT
GNGRARSLSLCTKGKIVGNREFSLDNSPCREVAAGSICCVEHNVAERFPDADWLRRQQIQ
GYLGIPLHDKQQNSFGFISVSYCRPIPDTTFATDTLKLFALQITAELERSRAINALQDQK
QRLLDAQSISHIGDWHWHLPDNHFSWSDEMYRITATSKAVFTPTFSSLLSTLVHPDDQSF
FKTSMQNAISSGSLDFRHRIVLGNDQIRHVHQRGQVIRDVNDKPTGVQGTMQDITDRLQT
EQRLLEAKQQAEQATRVKSEFLANMSHEIRTPMNAIIGLVELCLNSSISAKQRDYLERVE
TASRSLMTIIDDILDFSKMEAGKMQLESVPFLLEEMLDKVFSTMSELCASKGIALIRPPK
TLTFLPVIGDPQRLRQIFINLIGNAIKFTEHGEVRVTLTELKRSAQQTCLQFSISDTGIG
MNAEKQAKLFQAFSQGDSSVTRHYGGTGLGLIISKQLVEQMGGTISVTSQENLGSTFTFS
VKLGITSLASIRNAQYQQKLPLDTGKLQHISGARVLLVEDNEVNRIVAIELLEQAHLQVD
VAENGEIALGKLQQTTYDCVLMDVQMPVMDGYQTTKQLRTLPGCQTLPVIAMTANAMSND
RNKCFQADMDDFISKPILPETLYATLAKWIKPRADGIPQTDPNSEQLESNPLPYLYGIDT
SAGLQHTAGNLAVYRKVLLKFAENHADTMNEIGQAFIHNQHDKAYQLVHTLKGLVGSLGA
LQLQSHLVRLEESLIDFRANIADVPYIDSNIAATTLEMSKVISSINSNLANSESHSDGEL
RYSTLETRQQLAILIDKLQTFDSDSDQQLERIMRHIDDKALLQILLPIKKQIANYQFVDA
AQALNHILEHRI
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaacttgccaatactgccaatcagatacgccggttcgtgctggtcgcagtg
tgtttactgttgataggtgagattaccgttgtgctctatcaaaacataaacggcacgagt
gagctgaccaaaatattgatagttttgctgcccggactggctgtcttgttgatttttagc
gaactgctgtcaaatcggcaaatttcatcctccggactgacacccatcggcgacttttac
gaccatctcgcccaatccgccatcgtggtcgataatcaggggattattcgccatgccaac
caggcagccgctttgtcggttggcaagtccccggcggaattagtcggacaagccatacac
gcctggtttcacccgaccaaccatgccgaaacagaatgtcccttatgccaacacatcaaa
gccggcaaggctatgcctgctagcgactatgcctttccaaatcaaacatggcagcaaatc
tcgcttacccgtctgtccacgcagaacaacagcgaattaattcagttccatatcgacatc
acgccgcgaaaacaagttgaagaacaattggccctggtcatagacggcgcccagctaggc
tactgggattggaattatctaagcggcgaacattccgtgaatcaacgttggctggacatg
ttgggcctcagccatgacgagctggataactatgtcagcgactgggacaaacgcctgcat
ccggacgacagacaacgagtgaaacagttcgttgccaaacatatagcctccgaccgcccc
tatgtcgtggaatttcgcatgcgccataaactcggccattgggtatggatacaaggttcc
ggcgccgttgtcgcgtacgatccggtcagcggcgctccaagccggctatgcggcacgcac
caagacatcagcgtgcgtaagcagtcggagcataatctgcaacgcgcctatcaaattatc
agccagagcgcggcggtggtattgaaatggaataattccgaaggattaccgatagagttc
gccactgagaacgcccgccagctgttcggctacagtgtcgaacaattgattaccggcaat
ctgttttatctcaacctgatccatcccgacgatgtcggggttttccttcgcgagatcgcc
acctgccgcaacgatccggactgttccgaaatagcgcatcaaccctatcgcatcgtcgcc
caaaacggcggcataaaatgggtgcaagaccgcaagatggtggtgcgcaacgagcaaggc
aagattattgactatcagggtctggtgagtgacatcactcagcagcgtcagcaatccagt
gtgattaggaatatcgtctccagcaacctgccgcaaagtgccgcgtcgctgctggataat
ctgacgctattgaccgtggagaccctgggagccgattttgcattaattgccgaaacaacg
ggcaatgggcgtgcccgtagcctatcgctttgcacaaaaggcaaaattgtcggtaaccgc
gaattcagcctggataattcgccttgccgcgaggtggccgcgggctctatttgttgtgtc
gaacataatgtagcggaacgattccccgacgccgactggctgcgacgccaacaaattcaa
ggctatctgggcattccgttacacgacaaacaacaaaatagtttcggatttatctcggta
tcatactgtcggcccattcccgatactacctttgccacagacaccctgaaattattcgcg
ttgcaaattaccgccgaactggaacgcagccgtgccatcaatgcactgcaagaccaaaaa
cagcgcttactggatgcacaaagtatttcccatatcggtgattggcattggcatttgccg
gacaatcactttagctggtcggacgaaatgtatcggatcaccgcaaccagtaaagctgtt
tttactcccaccttttccagccttttaagcacgctggttcacccggacgaccaaagcttt
ttcaaaacatcgatgcaaaacgcgatcagtagcggcagtctcgatttcagacatcggata
gtgctcggtaacgaccaaattcgtcatgtccaccaacgcggacaagttattcgcgacgtt
aatgacaaacccactggcgttcaaggcaccatgcaagacatcaccgaccggctgcaaacc
gagcaacggctgttggaagccaagcagcaggcagaacaggcaacacgggtaaaatcggaa
tttctcgccaatatgagccacgaaatacgcacgccgatgaatgccattatcggcttggtt
gaattatgtctaaacagcagcatctccgccaaacagcgcgactacctggaaagagtggaa
accgcctcgcgctcgttgatgaccatcattgacgacattctggacttttccaaaatggaa
gccggaaaaatgcaactggaatccgtaccttttctattggaagaaatgctggacaaggtg
ttttccacgatgtcggaactctgcgccagcaaaggcatagccttgattcgcccacctaag
acgctaacttttctcccggtgatcggcgacccgcaacggctaaggcaaatttttatcaat
ctgatcgggaatgcgatcaaatttaccgaacatggcgaggtaagagtcacgctcaccgaa
cttaagcgctctgcgcaacagacttgtttgcagtttagtatcagcgataccggcatcggc
atgaatgcagaaaaacaagccaaactattccaggcgttcagccaaggggacagtagcgtc
acacgtcattacggcggcacgggcttgggcctgatcatttccaaacaattggttgaacaa
atgggcggaacgataagcgtcaccagccaagaaaacctgggctctacatttacctttagc
gtcaaactgggcattaccagccttgcttcgatacgcaatgcgcaataccaacaaaagctc
cccctcgatacggggaaattgcaacatatcagcggcgcccgagtattgctggttgaagac
aacgaagtgaatcgaattgtggccatcgagttgctggaacaagcacatttgcaagtcgac
gtggccgaaaacggcgaaatcgccttgggcaaactgcaacaaaccacttacgactgcgtg
ctaatggatgtgcaaatgccggtgatggatggctatcaaaccaccaaacaactacgaaca
ctccccggctgtcaaaccttgccggtcatagcgatgaccgctaacgcgatgagtaatgat
cgcaacaaatgctttcaagccgatatggacgatttcatcagcaaaccgatattaccggaa
acgctttacgccacgctggcaaaatggattaaaccgcgagccgacgggataccccagacc
gatcccaacagcgaacagttggaaagcaatccgcttccttatctgtatggcatagacacc
tcggccggcttacaacatacggcagggaatcttgccgtctatcgaaaagtgttactaaaa
tttgctgaaaaccatgcggataccatgaacgaaatcggccaagccttcatacataaccag
cacgacaaggcctatcaattagtccatactttgaaaggcttagtcggctccctcggagcg
ttacaattgcaaagccacttagtacggctggaagagtcgctaatcgatttccgcgccaat
attgccgacgtcccgtatatcgatagtaatattgccgccaccacactggagatgagcaag
gttatcagcagtatcaacagtaatttggccaacagcgaaagccacagcgacggtgaactg
cgctactcgacactggaaactcggcaacagctggccatattgattgataaactgcaaacc
ttcgattccgactcggaccagcaacttgagcggattatgcgccatatcgatgataaagct
ctgctgcaaatcttattgcccatcaaaaaacaaattgccaattaccagtttgtagatgcc
gcgcaagctctcaaccacatactggaacatcggatatag
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