Methylomonas sp. EFPC1: JWZ98_17115
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Entry
JWZ98_17115 CDS
T10319
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JWZ98_17115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
OB_RRP5_4th
HHH_6
PsbU
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QSB00385
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Position
3720555..3722831
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AA seq
758 aa
AA seq
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MDVIQRIAEELSVKPQQVAAAAALLDDGATVPFIARYRKEVTGGLDDTQLRNLEERLIYL
RELNSRRDSILDTIRSQGKLTPELELAILDADTKTLLEDLYLPYKPKRRTKAQIAREAGL
EPLADAILDNRDLIPEQIAASYIDAEKGIADVAAALEGARQIIMERISEDAELLAELRER
VWNKGILHASVVAGKEAEAAKFKDYFDYREAINKIPSHRALALFRGRNEDLLSLTLKPAE
LDQEEHQLCSQFVSQRLQVKDTEKPADTWLAETARFAWKIKLFTRIDMDLKLRLREAAEQ
EAIRVFASNLRDLMLAAPAGPKATMGLDPGIRTGVKVAVVDATGKLLTTETIYPHQPKNL
WDQSIAVLAKLIKQHQVQLVSIGNGTASRETDQLVADLMKQHKDLNFQKITVSEAGASVY
SASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQVQLARML
DTVVEDCVNAVGVDVNTASVALLKQVSGLSSSISENIVAFRDANGPFANRNQLKKVPRLG
DKAFEQAAGFLRVMNGDNPLDASAVHPEAYPVVNAILDDTGKSIRDLIGQSQFLRGLNPA
NYANANFGVPTVSDILQELEKPGRDPRPEFKSVQFKDGVEKITDLEPGMTLDGVVTNVAN
FGAFVDIGVHQDGLVHISHLADDFVKDPRSIVKTGDMVKVRVLEVDVARQRISLSMRKNV
DAGEIIPKEKPQRTVHKPKQQPALQNSMSNAFAKALKK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggacgttatccaacgcattgccgaagaactttcagttaagccgcaacaagtcgccgcc
gcagccgccctattggacgatggcgccacggtgcccttcatagcccgctatcgcaaagaa
gtaaccggtggcctggacgatacgcaattgcgaaatcttgaggaaagattgatttatttg
cgggaacttaacagccgccgcgactcaattctcgacaccattcgctcgcaaggaaagctc
accccggaactggaactagcaatactcgacgccgacaccaaaacgcttctggaagaccta
tacctaccctacaagcctaaacgccgcaccaaagcacaaattgctcgcgaagccggtctt
gaaccattagccgacgccatcctggataatcgcgacctaatccccgaacaaatcgcagct
agctatatcgacgctgaaaaaggtatcgcggatgtcgcggcagccctggagggcgcccgt
cagatcatcatggagcgtatttccgaagatgccgaactacttgctgaattgcgcgaacgt
gtttggaataaggggatcctgcacgctagcgtcgtggccggcaaggaggcagaggcagca
aaattcaaggattatttcgactaccgtgaagcgatcaataagattccgtcgcaccgtgcc
ttggctttgttccgcggtcgtaacgaggatttactgtccttaaccctgaaaccggcggaa
ctggatcaagaagaacatcagctatgttcacaattcgttagtcaacgcctgcaagttaaa
gacacagaaaaacccgccgatacctggttggccgaaaccgcccgctttgcctggaaaatc
aaactatttacccgtatcgatatggatctaaagctgagactgcgcgaagccgccgagcaa
gaagccattagagtgtttgccagcaatttgcgcgacttgatgctggcggcgccagccggt
cccaaagcgaccatgggcctggaccccggcattcgcacaggtgtcaaagttgctgtggtt
gacgcaaccggcaagctgttgaccacagaaaccatttacccgcatcaacctaagaacctg
tgggatcaatcgatagcagttctggctaaattgatcaagcagcaccaagtacaactggtg
agtatcggtaacggcaccgcttctcgggaaactgatcaattggttgcagacttgatgaag
caacataaagaccttaattttcaaaaaatcacagtttccgaagccggcgcgtcggtatat
tcggcatcggaactggctgctaaggagtttccagacctcgacgtctcattacgcggcgca
gtatcgatagcccgccggctacaagacccactggcggaactggtgaaaatcgatccaaaa
tcgataggcgttggtcaatatcaacatgatgttaaccaagtgcaattggctcgaatgctc
gataccgtggtagaggattgcgtgaacgcggtcggcgtagacgtaaacacagcttcggta
gctttgctgaaacaagtatctggacttagcagcagcatcagcgaaaacatcgttgcgttt
cgcgatgccaatggcccgtttgcgaaccgcaatcagctgaaaaaagtgccgcgcctaggc
gataaagcgttcgaacaagcagccggctttctcagagtcatgaacggcgacaacccgcta
gacgcatctgccgtacatccggaagcctaccccgtggtcaatgcaatcctagatgatacg
ggcaaatcaatccgcgacttgatcggccaaagccagtttttacgcggcctgaatccggca
aactatgccaacgccaattttggcgttcccaccgtttcggatattttacaggaactggaa
aaaccaggccgcgacccgcgtccggagtttaaaagcgtgcaattcaaggatggcgtggag
aaaattaccgatcttgaaccgggcatgacgttagacggcgtcgtgaccaacgtcgccaat
ttcggtgcttttgttgatattggcgtacatcaagacggtttggtgcatatttcacacttg
gcggatgactttgttaaagatccccgtagcatcgtaaaaaccggtgacatggtaaaagtg
cgggtactggaagtggatgtggcacgccaacgtatctctctaagcatgcgaaaaaacgtg
gatgccggtgagattattccaaaagaaaaaccgcaaagaaccgttcacaaacctaaacag
cagcccgcgctacagaacagcatgagcaacgcatttgccaaggcgttgaaaaagtaa
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