Methylomonas sp. EFPC1: JWZ98_17125
Help
Entry
JWZ98_17125 CDS
T10319
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meep03400
]
JWZ98_17125
DNA repair and recombination proteins [BR:
meep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWZ98_17125
Archaeal homologous recombinant proteins
JWZ98_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
Suv3_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QSB00387
LinkDB
All DBs
Position
complement(3723352..3726798)
Genome browser
AA seq
1148 aa
AA seq
DB search
MRILNIVFKNINSLEGEGRVDFDQGPIADSGVFAITGPNGSGKTSILDVITLGLYGETFR
FDKPAEHVITKQANDSFAQVEFALDGERFRSSWQVKRPADANQDQVLQPEMSLTKLNDNS
ELLARTPNTVRTKIAELTGMDFHKFSKSMVLPQGDFAAFLNALDSERMDILEKISGTQIY
VEYRQRTEGNFHASLNRLTQLQQDIDLIPLLSPEALQAGEQDLQDFKDQVAELKNHQKQL
QQQLFTIENIHSLEGRQRQLLEQSKKVDAQIKLLQDDLQKIADFQQATQFREEVILLDGK
QGQIVQSQATLDAYRQELNALQRQLGEDVSNAIVPSLNGKSVEEQKQAIDALKLKVGDLK
LALPREAELVQTLQQQLDERKASLAEIDGWLQDHQVDASLQSDFPDVVQLRNLRTELAEL
AGKQKTQANWTKNTTAALKKNQTALRDTKTAVADLNERIEAARKTLLELAQGKSFEELKE
LLVEQQTRVNDFQELHSLAAVNAKFTKKSFFSWFSRNKAPELPDETRLQARLDALRDEMD
REENIGKALEQAVLNEALLKKFSGDRGKLVDGKPCFLCGSLDHPYVSKPPIQTNSKKALV
DQRGKMQALKAAIDSVSGQLAVAKKQGTQLSARQQRLQQMRSQWLVLSNRLNVVSAELDI
NNLSLQKRLWDAEAQELEKIKNLVNEHAQLQRNVAKWTAELEAKHALVEKLTASVEQLDA
TWRNRPQEYIESEQLFASRTAEQKALVDKLEKQLALLGEKLPGKGKENIVFDKLNTRRQD
YQIRELRQKGLLEEIASLQDRLQVSQAKIASYQEQMAGALTSLQTEESLGLHLVILEKQK
LIVELERQIATQQLELDAMRRVLANKIAGGVFADVDNLRSALELIDRRAEIEQKLEQQNT
QLAAIGEELAKLSADLQNELALMPANLNEADLLGMQRQLSQKIDIAEQEVATLETKLDKQ
SAYQEKYQSLQALLAEQRVIHAQAEAEMKLINDEQGGFRRRIQQLLVDNLLSQANRILEK
LSGRYYIRSLASDNGLALEVEDTKQKNLRRLPKTLSGGESFVVSLALALALAEIANNGKA
IDSLFLDEGFGNLDAEALYLAMSALEGLKTQGKTVGVISHVEGVKKRIKTQIELVKKANG
MSELKMVA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcggatactcaatatagtcttcaaaaatatcaattcactggaaggcgaaggccgagtc
gatttcgaccagggacctattgccgacagtggtgtgtttgctatcactggccccaacggc
tccggtaagaccagtatccttgatgtgattacgctaggcctatacggtgagacttttcgt
ttcgacaagcctgccgagcatgtaatcaccaagcaggcaaacgatagcttcgcacaggtt
gaatttgctttagatggcgagaggtttcgttcctcatggcaggtaaaacggcctgctgac
gcaaatcaagatcaggttttacagccggaaatgagcttgactaagttaaacgataattcg
gagttactcgccaggacaccaaatacagtacggaccaaaattgccgagttgacgggcatg
gactttcataaattcagcaaatcgatggtcttgccgcagggcgactttgcggcttttcta
aatgcgctggatagcgagcgcatggacattctggaaaaaatcagcggtacccagatctat
gttgagtatcggcagcggactgaaggtaactttcatgcatcgctcaatcgtttaacgcaa
ctacaacaggatattgatctgattcctttgctcagtccggaagccttgcaagccggtgag
caagacttacaggatttcaaggatcaagttgctgagttaaaaaaccaccaaaaacagttg
caacagcaactatttacaatcgaaaacattcactcactagaaggacgccaaagacaactt
ctcgaacagtcaaagaaagttgatgcgcaaattaagctattacaagacgatttacagaaa
attgccgactttcagcaagcgacgcagtttcgcgaagaagtaattttattggatggtaag
cagggacagattgtccagagtcaggctaccttggatgcttatcgtcaggagctgaatgca
ctacagcgccaacttggcgaagacgtcagtaacgcaatcgtcccaagcctgaatggtaaa
agcgtagaggagcaaaaacaggctattgacgcgctgaaattgaaagtgggtgatctcaag
ctggcgttgccgcgtgaagccgaactggtgcagacgctgcaacaacaattggacgaaaga
aaggccagtcttgcggaaatagacggctggttgcaagatcatcaggtggacgctagtttg
cagtctgactttcccgacgtggtgcagttacgtaatctccggacagaattggcggagctg
gccggtaagcagaagacacaagccaattggactaaaaacacgactgcggcgctgaaaaaa
aaccagactgctttgcgcgatactaaaacggcggttgccgatttgaatgagcgtattgaa
gctgcacgtaaaaccctactggagttggcgcaaggtaaaagtttcgaggagttgaaggag
ttactggtagagcagcaaacacgggtcaatgattttcaggaactgcactcgctggctgcg
gttaatgccaaatttaccaaaaaaagtttttttagttggttctctcgtaataaagcgccg
gaactgcccgatgagactcgcttgcaagccaggctggatgccctgcgagacgagatggac
cgtgaagagaatatcggcaaagccttggagcaagccgtgctgaatgaggcattgctgaaa
aaatttagcggtgatcgcggcaagttggttgatggtaaaccgtgttttttatgtggctcc
ttagatcatccctatgtttctaaaccgccaatccaaaccaactcaaaaaaagccttagtc
gatcagcgcggcaagatgcaggccttaaaagcggctatcgatagtgtctccgggcagttg
gcagtggcaaaaaagcaaggtactcaattgtctgctcggcagcaaagattgcagcaaatg
cgctcgcaatggttggttttgagcaaccgtttaaatgtcgtcagtgcggagttggacatc
aataatttgtctttgcaaaaacgcttgtgggacgcagaagcccaggagttggagaaaatc
aaaaacctggtcaatgagcacgcgcagttacagcgtaatgtggctaagtggacggccgag
ctagaagccaagcacgctttggtagaaaaattaacggcgtcggtggagcaacttgatgcc
acttggcgtaatcggcctcaggaatacatcgaatccgaacagcttttcgctagtcgtacg
gcggaacaaaaggcgcttgttgataaactggaaaagcagttggctttattgggtgagaag
ttaccaggaaaaggcaaagaaaatatagtcttcgataagctcaatacccggcgccaggat
tatcaaatccgcgagttacgtcagaagggcttgctggaggagattgctagcttgcaagat
agattgcaagtcagccaagcaaaaatagccagttatcaggagcagatggcaggcgctttg
actagtttgcaaacggaagaatcgctgggtttgcatctagttatcctggagaagcaaaaa
ctcatcgtcgaattggagcggcaaatagccacccagcaactcgaactagatgcaatgcgg
cgagttctagctaataaaattgcgggtggcgtttttgctgatgtcgataatttacggtcg
gctttagagctgatcgataggcgggcggaaattgagcaaaagctggaacagcaaaatacg
caattggcagcaatcggcgaagaactggctaaactgtcagccgatttacaaaatgaattg
gcgcttatgccggccaatttaaacgaagccgatcttttgggaatgcaacgtcagctatcc
cagaaaatcgatatagccgaacaagaagtagctacgttggaaactaagctggataaacag
tcagcttatcaagaaaaatatcagagccttcaggcgcttttggctgagcaaagggtcata
cacgcgcaagccgaagcggaaatgaagttgattaatgacgagcagggtggtttccggcgg
cgtattcaacagttgttggtggataatttgttgtcgcaagccaaccggattttggaaaaa
ctaagcggacgttactatattcgcagtttggccagtgataatggtttggcgctagaggtt
gaagataccaaacaaaaaaatctacggcgattgccgaaaaccttgtctggcggggagagc
tttgtggtcagtttggctttggccttggcgctagctgagattgccaacaacggtaaggcg
atcgattcactgtttctggatgagggctttggtaatttagatgcggaagccctgtatctg
gcaatgagtgccttagaaggcttgaagactcaagggaaaacggtcggtgtaatttcacac
gtcgaaggggtaaaaaagcgcatcaaaacgcagattgaattggtaaaaaaagccaacggt
atgagcgagttgaagatggttgcttga
DBGET
integrated database retrieval system
