Methylomonas sp. EFPC1: JWZ98_17770
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Entry
JWZ98_17770 CDS
T10319
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWZ98_17770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meep03400
]
JWZ98_17770
Enzymes [BR:
meep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JWZ98_17770
DNA repair and recombination proteins [BR:
meep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWZ98_17770
Prokaryotic type
JWZ98_17770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSB00500
LinkDB
All DBs
Position
complement(3895690..3896307)
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AA seq
205 aa
AA seq
DB search
MSDQQHLLQHRQALLACTRCPAMIRPVVSGKPVLSPVLLIGQAPGDKEGVLGRPFAWTAG
KTMFKWFAQIGLDEASFRERVYMAAVCRCFPGKNPKGGDRVPNPQEIQQCASWLQAEVEL
LQPKLIIPVGKLAIQQMLPVDKLSDVIGGLHHLNFHGHDTDVIPLPHPSGASTWHRTEPG
AGLLQAALATIQAHAAWRQVLGRPT
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaacagcatttgctacaacaccgtcaagcgctgctggcctgtactcgctgc
ccggccatgatccgcccggtggtcagcggcaagccggtgctgtcgccggtgttgctaatc
ggtcaggcacccggcgataaagaaggggtgttgggcaggccgtttgcctggacggcgggt
aagacgatgttcaaatggtttgcccagatcggcctggacgaagccagttttcgggagcgg
gtctatatggcggcggtctgccgctgctttcccggtaaaaatcccaaaggcggcgaccgc
gtacccaatccgcaggaaatccagcaatgcgcgtcctggctgcaagcggaagtcgagctg
ttgcagcccaagttaatcatcccggtcggcaagctggcaattcaacaaatgctaccggtc
gataaactcagcgatgtcatcggcggtttgcaccacttgaattttcacggccacgacacc
gacgtcatcccactgccgcacccctccggcgcctccacctggcatcgcaccgagccgggt
gccggtttgctgcaagcggcgttggcaactattcaggcgcatgcggcctggcggcaagtg
ttggggcgtccaacgtag
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