Methylomonas sp. EFPC1: JWZ98_19300
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Entry
JWZ98_19300 CDS
T10319
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meep03009
]
JWZ98_19300 (rimO)
Enzymes [BR:
meep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JWZ98_19300 (rimO)
Ribosome biogenesis [BR:
meep03009
]
Prokaryotic type
ribosomal protein modification factors
JWZ98_19300 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QSB00775
LinkDB
All DBs
Position
complement(4199167..4200477)
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AA seq
436 aa
AA seq
DB search
MNNPRVGFISLGCPKALVDSEQILTKLRSEGYQVSPNYKDSDLVIVNTCGFIDAAVEESL
DSIGEALAENGKVIVTGCLGARQDEILARHPQVLKITGAHATDEVVSAVHEYLPPAHNPF
TDIVPPQGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIDDVMQEAEKLVDAG
VKELLIVSQDTSAYGLDLKYQSRRWRGREMQTRFYDLAEALGELGIWARMHYVYPYPHVD
DVVPLMAEGKILPYLDIPFQHANSRILKLMKRPAAAENNLERIRAWRKICPDLTIRSTFI
VGFPGETEQDFEELLQFLSEAQMDRVGCFAYSPVKGAVANDLPDAVPEALKQERLARFME
HQSVISAERLQRRVGRIETVLVDEVVEEGAVARSKSDAPEIDGQVFIDGASHLQVGDFVD
VEIEEADEYDLWGKLI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaataacccccgtgttggatttatcagtttaggttgcccaaaagccctggtcgatagc
gagcaaattttgaccaagctgcgtagcgagggctatcaggtgtcgccgaattacaaagat
tccgatctggtgatcgtcaatacctgcggctttatcgatgcggcggtcgaagaatcgctg
gacagcatcggcgaggctttggcggaaaacggcaaggtcatcgtcaccgggtgtctggga
gcgcggcaagacgagattttggctcggcatccgcaggttttaaaaatcaccggtgcgcac
gccactgatgaagtggtgtctgcggtgcacgagtatctgccgcccgcacacaacccattt
accgacatagtcccgccgcaaggcatcaagctgacgcctaagcattatgcttatctgaaa
atttcggaaggctgtaatcataggtgtacgttttgcatcatcccatccatgcgcggggat
ttggtgagccgacctatcgatgatgtgatgcaagaggccgagaagttggtcgatgccggc
gttaaggaactgctgatcgtttcgcaagataccagcgcttacggtttggatttgaaatat
caaagtcggcgctggcgcggccgggaaatgcaaacccggttttacgatttggccgaagcc
ttgggtgagttgggtatctgggcacggatgcattatgtctacccctatccgcatgttgat
gacgtcgtgccgctgatggctgaaggcaagattctgccgtatttggatattccgtttcag
cacgccaacagccgaattttaaaactgatgaaacgtccggctgcggcggaaaacaatttg
gagcgcatccgtgcgtggcggaagatttgtcccgatttgaccatccgcagcacgtttatc
gtcgggtttcccggcgaaaccgaacaagactttgaagagttgttgcagttcctgagcgaa
gcgcaaatggatagggtgggctgttttgcctattcgccggtgaagggagcggtggctaac
gatttgccggatgcagtgccggaagcgcttaaacaggaacgcttggcgcgctttatggaa
catcaatcggttatcagtgctgaacgtctacaacgccgagttggccggatcgaaacggtg
ttggtcgatgaggtggtcgaggagggggcggtggcgcgcagcaaaagcgatgcacccgaa
attgacggtcaggtgtttatcgatggcgcaagtcatttacaagtcggcgatttcgtcgat
gtcgaaatcgaggaagccgacgagtatgacttgtggggtaaactgatctaa
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