KEGG   Methylomonas sp. EFPC1: JWZ98_20645
Entry
JWZ98_20645       CDS       T10319                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
meep  Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:meep00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:meep02044]
    JWZ98_20645 (tssC)
Secretion system [BR:meep02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JWZ98_20645 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 PAV1-137_bromodom-like
Other DBs
NCBI-ProteinID: QSB01022
LinkDB
Position
complement(4474367..4475854)
AA seq 495 aa
MAELETQGGQGATQTLELDDFSALLSKEFKPGTEAANQVNTAVTTLAQYALQDVSKVSDD
AIKTIQSIIASLDQKITEQLNLVIHHPDFQKLEGAWRGLHYLVNNTETDEMLKIRVLNIT
KNELGKTLKKFKGTAWDQSPLFKKLYEEEYGTFGGEPFGCLVGDYHFDHSPQDVELLGEM
AKISASAHTPFISGVAPSVLQMESWSELANPRDLTKIFQTPEYAAWRSLRESEDSRYLGL
AMPRFLSRLPYGSKTDPVEEFDFEEDTSGADSSKYTWSNAAYAMAVNINRSFKYYGWCSQ
IRGIESGGAVEGLPVHSFPTDEGGVDMKCPTEIAITDRREAELAKSGFMPLLHKKNTDFA
AFIGAQSLQKPAEYTDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKERQDMQ
AWLNTWISQYVLTNPAVATEKDKARRPLAGAEVVVEEVEGNPGYYQSKFFLRPHYQLEGL
TVSLRLTSKLPSQKG
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggccgaattagaaacccaaggcggacaaggcgcaacccaaaccctggagttggacgat
ttttccgcattattgtccaaggagttcaagccaggcaccgaggcagccaatcaggtcaat
accgcagtaacaacgttggcgcaatatgcgttacaggatgtttccaaagtatccgacgat
gccattaaaacgatccagtcgattatcgccagcctggatcagaaaatcaccgaacaatta
aatctcgtcatacaccatcccgattttcaaaaactggaaggcgcctggcgcggcttgcat
tacttggtcaacaacaccgaaaccgacgaaatgttgaaaattcgcgtgttgaatatcacc
aaaaacgagttgggtaaaaccctgaaaaagttcaaaggtaccgcctgggaccaaagcccg
ctgttcaaaaaactgtatgaagaagaatacggcacctttggcggcgaacccttcggttgc
ttggtgggcgactaccatttcgatcacagtccgcaagatgtggaattgttgggcgagatg
gcaaaaatcagtgcctccgcgcataccccgttcatttccggcgtggcgccatcggtgctg
caaatggaaagttggtctgaattggccaatccacgcgatttgaccaaaatttttcaaacg
ccggaatacgcggcgtggcgctcgttgcgggagtccgaagattcgcgttaccttggtttg
gctatgccgcgcttcctgagccgtttaccctatggctcgaaaaccgatccggtcgaagag
tttgatttcgaggaagatacctctggggccgatagcagtaaatatacttggtctaatgct
gcttacgcgatggcagtcaacatcaatcgctcgttcaaatattacggttggtgttcgcag
attcgcggtattgaatccggtggcgcagtggaaggattaccggtgcattcgtttcctacc
gacgaaggcggcgtcgacatgaagtgcccgaccgagatcgccattaccgaccgccgtgaa
gcggaattggccaaaagcggtttcatgcccttgttgcacaaaaaaaataccgatttcgcc
gcattcatcggtgcgcaatcgctgcaaaaaccggctgaatacaccgatccggatgccacc
gccaacgccaatctggccgcgcgcctgccgtatttgtttgccacctgccggtttgcgcac
tatctgaaatgcatcgttcgagacaaaatcggatcgttcaaggagcgccaagacatgcag
gcgtggttgaacacctggatcagccaatacgtgttgaccaatccagcagtggccaccgaa
aaagacaaagcgcgtcggccattggccggtgcggaagtggtggtcgaggaagtcgagggt
aatcctggatattatcaatctaagtttttccttagaccgcactatcagttggaagggttg
acggtttccttgcgactgacatctaaattaccgtcgcaaaaaggttaa

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