Methylomonas sp. EFPC1: JWZ98_21600
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Entry
JWZ98_21600 CDS
T10319
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meep03000
]
JWZ98_21600
Transcription factors [BR:
meep03000
]
Prokaryotic type
Helix-turn-helix
Other families
JWZ98_21600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
Mg_chelatase
MCM
HTH_50
HTH_29
AAA
HTH_30
HTH_7
IIGP
AAA_16
KAP_NTPase
nSTAND6
DsrE
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QSB01198
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Position
4702464..4704251
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AA seq
595 aa
AA seq
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MDIALHLPHNVKIIKEACEFKTSLAFEVDRPIQAWRWMAQSRCVPDHTDWVRPEVSESWR
RCLEEYQLPLGNYARWDHWRFTTDPEPRINRAAHDIAEMLRHLGHQFDVFLKEAGVMLVL
TDADGHLLQVLGENPFASPFMLSLYEKHSRWSEAVLGNNGIGTAAQLKKPIAFQGMEHFV
SLLHPFTTVGYPLLDEDDNVQAVIGLISDRQESMNSLFAFLHLLCVLLNTNLPLTRSPVA
QARVLEKIPFKPAKRPPSQYESAMSEQLTALVEKAVKLQHHKIPMLITGESGVGKDHFVN
LLKHAGPRKNQPLIAINCASIPHDLIESELFGYEAGSFTGARSAGKPGKFLLADKGILFL
DEIGDMSLDLQSTLLRVLETSEFTPVGGSKPIKVDVQIVAATNVPLLEAVEAGRFRRDLY
YRLNGAQIHLPPLRERDDKLGIIHHILQRELANLPNPQAISICPSVIALIEQHPWPGNIR
QLINVIRATLYTAGDTLITREDLPLDFVEELGKVLPGNGNNASDNTLTYPISAAAGRTMT
LEDWELHGIKASLRECAGNISLAAKNLGITRTTLYRKIERFGLDKIDWREHSKAG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggatattgccttgcacttgccccacaacgttaaaatcatcaaagaagcctgcgagttc
aaaacctcactagcgtttgaagttgaccgcccgatacaggcctggcgctggatggcacag
agccgttgcgtgcccgatcacacggactgggtacgcccggaagtctcggaatcctggcgc
cgctgtctggaagaataccaattgccattgggcaattacgcgcgctgggatcattggcgt
ttcaccaccgatccagagccgcgcatcaaccgtgccgctcacgatattgccgaaatgctg
cggcatttggggcatcagttcgacgtgtttttgaaagaagccggcgtcatgctggtattg
accgatgccgacggacacctgttacaagtcttgggcgaaaatccgtttgccagccctttc
atgctgagtttgtacgaaaagcacagccgctggagcgaagcggtgttgggcaataacggc
atcggcaccgccgcgcaactgaaaaaaccgattgcttttcagggcatggagcattttgtc
agcctgttacacccattcaccacggtcggttaccccttgttggatgaggacgataacgtc
caagccgtgatcggcttgatcagcgatagacaggaaagcatgaactccttgttcgcattc
ttgcatttgttgtgcgtactcctaaataccaatctgcccttaacccggagtccggttgcg
caagcgcgggtattggaaaaaatccccttcaaacccgccaaaaggccgcccagccaatac
gaatcggcaatgtcggaacaattaaccgccttggtagagaaggcggtgaagctgcaacac
cataagattcccatgctgattaccggcgaatcgggcgtgggcaaggatcatttcgtcaat
ctcctgaaacacgccggaccgcggaaaaatcagcctttgatcgcgatcaactgcgcatcg
attccgcatgacttaatcgaaagcgaactgttcggttacgaagcgggcagttttaccggc
gctcggagtgccggcaagccggggaagtttctgttagccgacaaaggtattctgtttctg
gacgaaatcggcgatatgagcctggatttgcaatcgactttgctgcgagtgctggaaacc
tcggaatttacgccagtcggtggtagcaaaccgatcaaggtggatgtgcaaatagtcgcc
gccaccaacgtacccttgttggaagccgtcgaagccggccgcttccgccgcgatttgtat
taccgtttgaacggcgcgcaaattcatttgccgcccttgcgcgagcgcgacgacaagctg
ggcatcattcaccacatcttgcagcgcgaactggctaatctgcccaatccgcaggcaatc
agtatttgccccagcgtcattgccttgatcgagcaacacccgtggccgggcaatattcgc
cagttgatcaacgtcatcagagcaacgctatacaccgctggcgacacactgattacccgc
gaggatttgccgctggattttgtcgaagaactgggtaaggtgctgccggggaacggcaat
aacgcttcggacaacacgctaacttatccaatatcggcggctgcgggccgtaccatgacc
ctggaagactgggagttacacggcattaaagccagcctgcgggaatgcgcgggcaatatt
tccttggcggcgaaaaacttaggcataactcgcaccacgctgtaccggaaaatcgagcgc
ttcgggctggataaaatcgactggcgggaacattctaaggccgggtaa
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