Methanobacterium sp. ERen5: NKF70_03605
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Entry
NKF70_03605 CDS
T10395
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
meer Methanobacterium sp. ERen5
Brite
KEGG Orthology (KO) [BR:
meer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meer03016
]
NKF70_03605 (endA)
Enzymes [BR:
meer01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NKF70_03605 (endA)
Transfer RNA biogenesis [BR:
meer03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NKF70_03605 (endA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
BpuSI_TRD
Motif
Other DBs
NCBI-ProteinID:
UTB33359
LinkDB
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Position
661055..661558
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AA seq
167 aa
AA seq
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MNAELSGDIVIVKNGNTAKIHEKSHFGNLSEDGLQLSFVEALYLMEKGKLEVEDDGEEIS
IDDMFGFIRKTSAFSNYIVYRDLRNRGYIVKTGFKYGSEFRLYDRGKSPGDGHSKYLVKV
ASENSEFLMSDLSSYVRVAHGVNKKLLFAVVDEENDITYYNVEWTRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagaattatctggtgacatcgttatagttaaaaacggaaataccgcaaaaatc
catgagaaaagccattttggaaatttatccgaggacggacttcaactttcatttgtggaa
gccctttacctaatggaaaagggaaaattagaagttgaagatgatggcgaagaaatttcc
atcgacgatatgtttggattcataaggaaaaccagtgcattttctaattacatcgtgtac
agggacttgcgtaacaggggttacatagtaaaaactggattcaaatatggatctgaattc
cgactgtatgatcgtggaaaatcccctggagatggacattcaaaatacctcgttaaagtg
gcaagtgaaaacagtgaattcctgatgtctgatctttcaagctatgtcagggttgcccat
ggagtgaataagaaattgttgtttgctgtggtggacgaggaaaacgatataacttactac
aacgttgaatggactaggccatga
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