Methanobacterium sp. ERen5: NKF70_07910
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Entry
NKF70_07910 CDS
T10395
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
meer Methanobacterium sp. ERen5
Pathway
meer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NKF70_07910 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meer03021
]
NKF70_07910 (rpoB)
Enzymes [BR:
meer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NKF70_07910 (rpoB)
Transcription machinery [BR:
meer03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NKF70_07910 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zf_2nd_IFT121
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UTB31481
LinkDB
All DBs
Position
1446466..1448277
Genome browser
AA seq
603 aa
AA seq
DB search
MKKSKIYINGKIIGTSDDPEDFVRSMREKRRTGEVSPEMNITYYDETDEIFLFTDPGRTR
RPLIIVENGESKLTEETIQLIEDGELDWDGLINQGIIEYMDAEEEENSYIAMFPEDITEN
HSHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGMTKQALGLYVSNYNMRTDTRAHLLH
HPQVPLVKTKSMDATKYDKRPSGQNFVVAVMSYEGYNMEDALILNKASIERGLARSSFFR
SYEASERRYPGGQEDKFEVPENIVRGYRSEEVYRHLDEDGIVNPEVEVKSGDVLIGKTSP
PRFLEEIDEFGTVAERRRETSVTVRHGEHGVVDAVLLTETVEGSKLAKIRVRDQRQPEFG
DKFASRHGQKGVVGLIVSQENMPFTEVGVVPDLIINPHAIPSRMSVGQVIEMLAGKAGTM
EGKRMDGTPFGGKQEAEIMELLKQNGFETAGRESLYNGITGERIEAEIFVGVAFYQKLHH
MTADKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEALVCQDCGMIAIYDRIRDKKFCAICGESETFPVEISYAFKLLLDELKSLCIFPKLVLE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaatccaagatatatattaacggcaaaatcatcgggacaagtgatgatccagaa
gactttgttaggtccatgcgggaaaaacgaagaactggtgaagtatctcccgaaatgaac
ataacctattatgatgaaacagatgaaatttttctattcactgatccaggccgaaccaga
aggccactcataatagttgaaaatggagagtccaaactcacagaagaaaccattcaattg
attgaagatggtgaattagattgggatggtcttatcaaccagggaataattgaatacatg
gatgcagaggaagaagaaaactcctacattgcaatgtttccagaggacataactgagaat
catagccatctggagatagatccctccacaatgttgggaatctgtgcaggtattattcca
tttgcaaaccacaactcctctccaaggaacaccatggaagcaggaatgaccaaacaagca
cttggtctttacgtatcaaattacaacatgagaactgatacacgtgctcatttattacat
catccacaagtaccactggttaaaaccaaaagtatggatgcaaccaagtacgataaacgt
ccttcaggacagaacttcgttgttgcagttatgtcgtacgaaggatacaacatggaagat
gcactaattttaaacaaagcatccatcgaaaggggtcttgcaagatcttcatttttcagg
tcctacgaagcttcagaacgacgttaccctggtggacaggaagacaagttcgaagttcca
gaaaatattgtgaggggctacagatcagaggaagtttacagacatcttgatgaagacgga
atagtcaaccccgaagttgaggtcaaatctggagatgttctcataggtaaaacatcacct
ccaagattccttgaagaaatagacgaatttggaacagttgcagagagaagaagagaaaca
tctgtaacagtgagacacggtgaacacggtgttgttgatgcagttcttttgactgaaaca
gttgaaggcagtaaactggctaagataagggtcagggatcagagacaacctgagtttgga
gacaaattcgcatcaaggcacggtcagaagggagttgttggactcatagtttcccaggaa
aacatgccatttacagaagttggagtcgtaccagacctaataataaatccacacgcaatt
ccttcaaggatgtctgtgggtcaagttatagagatgcttgcaggtaaagccggaaccatg
gaaggtaaacggatggacggtactccatttggaggtaaacaggaagcagaaatcatggaa
ctactcaaacagaatggtttcgaaactgctggtcgtgaatctctgtacaatggaataact
ggcgaaagaattgaagctgaaatatttgttggagtagctttctaccagaaactgcaccac
atgacagcagacaaagtttatgcaagatccagaggccctgtacaggttttaacaaggcaa
cctacagaaggtagggcaagagaaggtggattaagatttggtgagatggaaagggattgt
ctcattgcacatggtgcggcattagctttaaaagaaaggctattagatgaatctgataag
tatgaagcccttgtatgccaagattgtggtatgatagccatatacgacagaatacgagat
aaaaaattctgtgcaatttgtggagaatcagaaactttcccagttgagatttcatacgca
ttcaaacttttactcgacgaactaaagagcctgtgtatattccctaaattggttcttgag
gacaaagcatag
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