KEGG   Methanobacterium sp. ERen5: NKF70_09645
Entry
NKF70_09645       CDS       T10395                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
meer  Methanobacterium sp. ERen5
Brite
KEGG Orthology (KO) [BR:meer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meer03019]
    NKF70_09645
Messenger RNA biogenesis [BR:meer03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NKF70_09645
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 Cas3_HD GGR_cat Gp18_dom_I
Other DBs
NCBI-ProteinID: UTB31771
LinkDB
Position
complement(1775882..1776790)
AA seq 302 aa
MFKKEEKDFIKNIDSNGRIRSQFVVADKIIKIAASGRKYIDVNLTDKTGDIVGRMFPDDN
FNDVFEHIAIGKIHRIIGNVNEFPRGSGKFNIIISVIKELGEEEYNIEDFIKSSDRNKEE
MIVEIMSTIENIENEHLKKLLDSFFDDEKFVAEFCNVPSAKVYHHNYVGGLLEHTAEVLK
VCKVGVEIFPELDKDLLYTGAILHDIGKIRTYEYNLIKIDFSNEGKRLDHLFISTDMVKE
KIIETKMPDELAIEVLHLILSHHGEVQNGWGSPVTPQTPEALTLHHADNLDAKVKGMIQK
IN
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtttaaaaaagaagaaaaagattttataaaaaatattgattctaacggaagaatcaga
tcacaatttgttgttgcagataaaattatcaaaatagcagcttctggtcggaaatatatt
gatgttaatctaactgacaaaacaggagatattgtgggtagaatgttcccagatgataat
tttaatgatgtttttgaacacatcgcaattggaaagattcatagaattattggcaatgta
aacgaatttccacgaggttctggtaagttcaatataattattagtgttattaaggaatta
ggtgaagaagaatataatattgaagactttataaaatcatcagaccgaaacaaagaggaa
atgatagttgaaataatgtcgacgatcgaaaacattgaaaatgaacatcttaaaaaatta
ttagatagtttttttgatgacgaaaaattcgtggcagaattttgtaatgtgccatcagcg
aaagtatatcatcataattatgttggtggtctcctagaacatacagcggaagttttgaaa
gtctgtaaagtgggtgttgagatatttccagaattagataaagatcttttgtatactggg
gctattttacatgatattggaaaaattagaacgtatgaatataatcttataaaaatagat
ttctcaaatgaagggaaacgtctggatcatttatttatatctacagatatggtcaaagaa
aaaattatagaaactaaaatgcctgatgaactcgctatagaagttttacatttgatttta
agccatcatggagaagtacaaaatgggtggggttcccctgtaactcctcaaactcctgaa
gctttaacattacatcatgcagataatttagatgctaaagtgaaaggaatgatccaaaaa
ataaattaa

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