Methanimicrococcus stummii: MmiEs2_01260
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Entry
MmiEs2_01260 CDS
T09451
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
mees
Methanimicrococcus stummii
Pathway
mees03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mees00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmiEs2_01260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mees03019
]
MmiEs2_01260
Messenger RNA biogenesis [BR:
mees03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MmiEs2_01260
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MmiEs2_01260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Zn_ribbon_3
EXOSC1
Prok-RING_1
DUF7573
C1_1
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WNY27947
UniProt:
A0AA96VKC2
LinkDB
All DBs
Position
120933..121991
Genome browser
AA seq
352 aa
AA seq
DB search
MSRVQKKPIRRRLKDTAGKPDEPRATEPVAAAPAEDSQKPRIPRKPRPEIAKQEAEAPVR
RASRPRATEAESSEAEDKPRRAPAERAERPERRSDSGSERSSDRRGGDRNGGRDGNRSRD
RDGGRDGGRGRDRNGGRGDRNGKGGFGGRKPAEKKKRPEKIVYEKTKEFVFPGDIVGAIE
EYKPGFGTVNDDGTIRATVSGVIGINKEHRMVSVIPKTKTLNTITEGDIVIASISDVRES
NARVNIVAAEKSLDEEIVNNGNAEIYVSNIKDGFAKSVSDEFSVGDIVRAKVIDSSKIGL
STVDSDLGVLKAYCSRCKTSLTRSDDGLVCSNCGNRERRKLADGYGKGIPSV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagtgcaaaaaaagccgatccgaagaagattgaaagataccgcgggcaaaccc
gacgaaccgagagcaacagagccggtcgcggcagctccggcggaagactctcaaaaacct
cgcattccgagaaaacccagacccgaaattgcgaagcaagaggctgaagcgcctgtcagg
cgcgcaagccgcccgcgcgcaaccgaagccgaaagcagcgaagccgaagacaagccgcgc
cgcgcgccggctgagcgcgccgagcgtcccgaacgcagatctgacagcggcagcgagcgc
agcagtgacagacgcggcggtgaccgtaacggcggccgtgacggcaaccgcagccgtgac
agagacggcggacgtgatggcggccgcggcagagatcgcaacggcggacgcggcgacaga
aacggcaaaggcggtttcggcggcagaaaacctgctgagaagaagaaacgccccgaaaaa
atcgtttacgagaaaacgaaagaattcgttttcccgggtgatattgtcggcgcaatcgaa
gagtacaaacccggattcggaaccgttaacgatgacggcacaatccgcgcgacggtttcc
ggtgtcatcggcatcaacaaagaacaccgcatggtttccgttattcccaagacgaaaacg
ctgaacacgattacggaaggcgacattgtgatcgcgtccatttcggatgtccgcgaatcc
aacgcgcgcgtcaatattgttgcggcggaaaagagtttggatgaagaaatcgttaacaac
ggcaacgccgaaatttacgtttccaacatcaaagacggctttgcaaaatccgtcagcgac
gaattcagcgtcggcgacattgttcgcgcaaaagtcatcgacagctcaaaaatcggtttg
tccacggttgattccgacctcggcgttttgaaagcttactgttcccgatgcaaaacatca
ttgacaagaagcgacgacggcttggtttgcagcaactgcggcaaccgcgaaagacgcaaa
ttggcggacggatacggaaaaggaattccttccgtttaa
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