Methanimicrococcus stummii: MmiEs2_04640
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Entry
MmiEs2_04640 CDS
T09451
Symbol
rph
Name
(GenBank) Ribonuclease PH
KO
K12589
exosome complex component RRP42
Organism
mees
Methanimicrococcus stummii
Pathway
mees03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mees00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmiEs2_04640 (rph)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mees03019
]
MmiEs2_04640 (rph)
Messenger RNA biogenesis [BR:
mees03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MmiEs2_04640 (rph)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MmiEs2_04640 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
WNY28280
UniProt:
A0AA96ZWT3
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All DBs
Position
483740..484534
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AA seq
264 aa
AA seq
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MTDAVLSALKKDFIHNLIVEGKRADGRDFREMRDISVQTHVIAKAEGSAYVKYGETKILV
GIKLQKGTPFPDSPNSGIIMTGMELNPLASPNFEAGPPKEEAIEMSRIVDRGIRESHSID
LEKLCIREGELVWMVFVDISVINDAGNIVDASALASIAALLTTTVPADDANGFESIPLPM
QNIPVGVTVASIDNTLILDPSLDEENVCDTKLTIITENEGALSGMQKSGAEPLLPETVIE
MVNLAREKGAEIRERYLSNLSIRG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcagtactttccgcattaaagaaagattttattcacaatttaattgtcgaa
ggcaaacgcgccgacggtcgcgatttcagagaaatgcgcgacatttccgtccaaacgcat
gtcattgccaaagccgaaggttccgcttacgtaaaatacggcgaaaccaaaattttagtc
ggcattaagctccaaaaaggaacgcctttccctgactctccgaattccggtatcatcatg
accggcatggaattaaacccgcttgcatcacccaacttcgaagcaggcccgccgaaagaa
gaagccattgaaatgtccagaatcgttgaccgcggaatccgcgagtctcattccattgat
ttggaaaaactctgcatcagagaaggcgaactcgtttggatggttttcgttgacatcagc
gtgattaacgatgccggaaacattgttgacgcgtctgcgctggcttcgattgccgctttg
ttgacgacgactgttccggcagacgacgcgaacggttttgaatccattccgcttccgatg
caaaacattccggtcggcgtgaccgttgccagcattgacaacacgctcattttggacccg
tctttggacgaggaaaacgtttgcgatacaaagctgacgattattaccgaaaatgaaggc
gcgctttccggcatgcagaagagcggcgcagaacctttgctccccgagacggtcattgaa
atggtcaatctcgccagggagaaaggagccgaaataagggaaagatatttatctaatctt
tctataagaggttga
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