Methanimicrococcus stummii: MmiEs2_07160
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Entry
MmiEs2_07160 CDS
T09451
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mees
Methanimicrococcus stummii
Brite
KEGG Orthology (KO) [BR:
mees00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mees03016
]
MmiEs2_07160 (truD)
Enzymes [BR:
mees01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MmiEs2_07160 (truD)
Transfer RNA biogenesis [BR:
mees03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MmiEs2_07160 (truD)
Prokaryotic type
MmiEs2_07160 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF1189
Motif
Other DBs
NCBI-ProteinID:
WNY28525
UniProt:
A0AA96VA33
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All DBs
Position
complement(736835..738241)
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AA seq
468 aa
AA seq
DB search
MRDMTEEQTNISETMDTKMSETTGINVPALENEIGINLYSTTTAGVSGVLRYQPTDFIVR
EISNYPYEENDVIDKNRKYLMVEVTKENWDTNHFLKAYSSALGISHKRITYAGTKDKRAV
TVQKMSLYDVTKEQVENVHLKDVSVRVLGRSQQPIGLGDLEGNQFQIVIRNIDLPEAEAK
AAAEKTTADILKAGGVPNFFGIQRFGSRRPVTHHVGEDLLKGDLEKAILRYVSEVYPDEP
EETKNVRRYIAETNDFKGGVLQFPDYLGHEKALLNHLIARPGDFKGAFMVLPKNLYTMFI
HAYQSWLFNRIICERLKNGLSLNQAVVGDIVCYRAKDKTPDPSRLEKVDEDNIDGINGLL
KRGRAFITAPLFGSVTPFADGIPGEIECRLIEETGFTPEDFKMPAFPEVASKGLRKEILL
EVEPNVLVAADDLNEGKTKLTLEFKLPKGSYATTVLREYMKTNPLNMS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagagacatgacagaagaacagacaaacatttccgaaacaatggacacaaaaatgtcc
gaaacaacaggtataaatgtgcctgctctggaaaacgaaatcggaattaatctttattcg
acgacaaccgccggcgtcagcggcgttctcagatatcagccgaccgatttcattgttcgg
gaaatttcaaattatccttatgaagagaatgacgtgattgataaaaatcggaaatatttg
atggttgaggtcacgaaagagaattgggataccaaccattttttaaaagcgtattccagc
gcgctcggaatcagtcataaaagaatcacttacgcgggaacgaaagacaaacgcgccgtc
acggttcagaaaatgagtctttatgacgtgacgaaagaacaagttgaaaatgttcatctc
aaagacgtttccgttcgcgttctcggccgttctcagcagccgatcgggctcggcgatttg
gaaggcaatcaattccaaatcgtgattcgaaacatcgatttgccggaagcggaagcaaaa
gccgccgccgaaaaaacaaccgctgatattttaaaagccggcggcgttccgaatttcttt
gggattcaaagattcggatcccggcggccggtaacgcatcacgtcggtgaagatttgctc
aaaggcgatttggaaaaagcgattttaagatatgtctcggaagtttatcccgacgaaccg
gaagaaaccaaaaacgtccgccgctacatcgcagaaaccaatgatttcaaaggcggcgtt
ttgcagttcccggattatttgggacatgaaaaagcgcttctcaatcatttaatcgcgcgt
cccggcgactttaaaggtgcgtttatggttttgccgaaaaacctttacacgatgtttatt
cacgcttaccagtcctggcttttcaaccgcattatttgcgaacgcctgaaaaacggcctt
tccttaaatcaagcggttgtcggcgacatcgtttgctatcgcgcaaaagacaaaacgccc
gacccgtcacgccttgaaaaagtcgatgaagacaatattgacggcattaatggtctttta
aaacgaggccgcgctttcatcacggcgccgcttttcggatcggtaacaccgtttgccgac
ggcattccgggcgaaatcgaatgccggttgattgaagaaacaggatttacgcccgaagat
ttcaaaatgccggcgtttcccgaagttgcttcaaagggtcttcgaaaagagattttactc
gaagtcgagccgaatgttttggttgcagcggatgatttgaatgaaggcaaaacaaaattg
acgcttgaattcaaattgccgaaaggaagttacgcgacaaccgttcttcgagaatatatg
aaaacaaatccgctcaatatgagctga
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