Methanimicrococcus stummii: MmiEs2_07750
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Entry
MmiEs2_07750 CDS
T09451
Symbol
rpoB_1
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mees
Methanimicrococcus stummii
Pathway
mees03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mees00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MmiEs2_07750 (rpoB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mees03021
]
MmiEs2_07750 (rpoB_1)
Enzymes [BR:
mees01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MmiEs2_07750 (rpoB_1)
Transcription machinery [BR:
mees03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MmiEs2_07750 (rpoB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_Ribbon_TF
DUF421
Zn_ribbon_8
RUBY_RBDX
RNA_pol_Rpb2_45
Zn_ribbon_3
Ribosomal_aS21
DUF1451
DUF7130
Auto_anti-p27
DUF7129
Motif
Other DBs
NCBI-ProteinID:
WNY28580
UniProt:
A0AA96ZX22
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All DBs
Position
complement(806814..808652)
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AA seq
612 aa
AA seq
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MMNRSKIFLDGELIGTHDDPMTLVSNIREMRRKGYFSKQVNVAFLEHTGEVIISADIGRA
RRPLLIVENGQILVTEEHLEKLKTGELNFEDLIDLGLIEYLDAEEEENAYVALRERELNE
RHTHMELSPDLILGICSGMIPYPEHNAAPRCTMGAAMIKQCIGVSTANHKLRPDTRANIL
HYPQRAMTYTQTCESIGFDDRPAGQNFVVAILSYEGYNIEDALVFNRGSIERGLGRSHFV
RTFEGEERRYPGGQEDKFEIPDSEYRGARSAESYAELDEDGLVNPETYAAPNAVLIGKTS
PPRFLEENSGGLDSGFSQQRRESSVTMRSNEKGIVDNVILTESINGTRLAKVKVRDERIP
DIGDKFASRHGQKGVIGLKVNIADMPFSESGLSPDLMINPHAIPSRMTVGHVLEMIGGKV
GSMEGRRINATAFSAAEENGDDEDKLRSTLMQYGFAHTGKEVFYDGVTGKMIPADVFVGV
ILYQKLHHMVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMCLKE
RLLEESDKDEEYVCSSCGMIATFDRQRNMAVCPNCGADTDIYLVEMSYSFKLLLDEIKSL
GVAPRMELEDAV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagatctaaaattttcttggacggcgaactcatcggaacgcacgacgacccg
atgacgcttgtttccaacattcgtgaaatgagacgaaaaggctacttctccaaacaagtc
aacgtcgctttcttggagcacaccggcgaagttatcatttcagccgacatcggccgcgcc
agaagaccgcttttaatcgttgaaaacggtcagattctcgtcaccgaagaacaccttgaa
aaactcaaaaccggcgaactgaatttcgaagatttgatcgatctcggtctcatcgaatat
ttggacgcagaagaagaagaaaacgcgtatgtcgcgcttcgtgaaagagaattaaacgag
cgccacacgcacatggaactctcacccgatttgattttgggtatctgctccggtatgatt
ccgtatccggaacacaatgcggccccgcgttgtacgatgggcgcagccatgattaagcag
tgtatcggcgtctcaacggcaaaccacaagctcagacccgacacgcgcgcaaacattttg
cattatccgcagcgcgcgatgacttacacgcagacttgcgaatccatcggtttcgatgac
aggccggccggtcagaatttcgttgtcgccattctttcttacgaaggctacaacattgag
gacgcgctcgttttcaacagaggctccatcgaaagaggtctcggccgcagtcacttcgtt
cgtacgttcgaaggcgaagaacgccgctaccccggcggtcaggaagacaaattcgaaatt
cccgactccgaataccgcggcgcaagaagcgccgagtcttacgccgagcttgatgaagac
ggtttggtcaaccccgaaacatatgccgcgccgaatgcggttttgatcggtaaaaccagt
ccgccgcgttttcttgaagaaaattcgggcggccttgattccggtttcagtcagcaaaga
cgtgaaagttccgtcaccatgcgttccaacgaaaaaggtatcgttgacaacgttatttta
acggaatccattaacggcacaagactcgcaaaagtcaaagtcagagacgagcgtatcccc
gatatcggtgacaagttcgcttccagacacggtcagaaaggcgttatcggcctcaaagtc
aacatcgccgacatgccgttctccgaatccggtttatcacccgacttgatgattaatccg
cacgcgattccttcccgtatgacggtgggacacgttctcgaaatgatcggcggaaaagtc
ggttccatggaaggacgccgcattaacgcgacagccttctccgccgccgaagaaaacggc
gacgatgaagacaagctcagaagcacgttgatgcaatacggctttgcccacacaggcaaa
gaagtgttctatgacggcgtgaccggaaaaatgatcccggcagacgttttcgtcggtgtc
attctttaccagaaactccaccacatggtcacatcaaaaatgcacgccagatcccgcggt
cccgttcaggtgcttaccagacagccgacggaaggtcgtgctcgtgaaggcggtcttcgt
ttcggtgaaatggagcgtgacgttttagtcggccacggcgctgcgatgtgtctcaaagaa
agattattggaagagtccgacaaggatgaagagtatgtctgcagcagctgcggtatgatt
gccacatttgacagacagcgcaacatggccgtctgccccaactgcggtgccgacaccgac
atttaccttgttgaaatgagttattccttcaagctcctgcttgatgaaattaaatccctc
ggcgttgcgccgagaatggaacttgaggatgcggtgtaa
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