Methanimicrococcus stummii: MmiEs2_16320
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Entry
MmiEs2_16320 CDS
T09451
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mees
Methanimicrococcus stummii
Brite
KEGG Orthology (KO) [BR:
mees00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mees03016
]
MmiEs2_16320 (truB)
Enzymes [BR:
mees01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MmiEs2_16320 (truB)
Transfer RNA biogenesis [BR:
mees03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MmiEs2_16320 (truB)
Prokaryotic type
MmiEs2_16320 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WNY29405
UniProt:
A0AA96ZXU1
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All DBs
Position
1796855..1797928
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AA seq
357 aa
AA seq
DB search
MKKQKGKEKKAESELYRNDWFFADSGDFVTLADSKIGEFGTFPENRPIREYIEKGVVVLN
KPAGPTSHEVAAFVRDILEVDVAGHSGSLDPGVTGVQPVMIGKATRAVAALRLSGKEYIC
LMKLQRSVPEKVIRSTVAEFTGGVYQMPPVRSAVKRQLRLRTIYYSEVLEIQDTYVLMRV
GCEAGTYIRKLCHDIGLALGVGAQMQELVRSKAGPFTDARPVSLQELKDAYVFWTEDGDE
SFLRELILPMESAFSQLPRLVVRDSAVDALCSGAFLARPGLAGYNTNIKKGDLVAVFSQK
GEIISLSIALMTPEEISENEFGFVAKPKAVLMEKGIYPAVWKNRQARENCFVSSVEE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaaagggaaaggaaaaaaaagcggaatccgaactttaccgcaatgactgg
ttttttgccgacagcggagattttgttacgcttgccgattccaaaatcggtgaattcgga
acttttcccgaaaaccgcccgattcgtgaatatatcgaaaaaggcgtcgttgttctcaat
aaacccgccggcccgacgagccatgaagtcgcggcgtttgttcgcgatattttagaagtt
gacgtcgccggtcattccggatctcttgatcccggtgttacgggtgttcagccggtcatg
atcggaaaagccacgcgcgcggttgcagcacttcgtttatccggtaaagaatatatttgt
ttgatgaaactccagcgctctgttcccgaaaaagtaatccggtcaaccgttgcggaattt
acggggggcgtttatcaaatgccgccggttcgatccgcggttaaaaggcaattgcgattg
cgtacgatttattattccgaagtcttggaaatccaagacacttatgtgctgatgcgtgtc
ggttgcgaagcaggcacttacatccgaaaactctgccacgacatcggccttgcgctcggt
gtcggcgcgcaaatgcaggagctcgtccgctccaaagcggggccgtttacggatgcgcgt
cccgtttctttgcaggaactcaaagacgcttacgttttttggaccgaagacggcgacgaa
tctttccttcgggaattgattttgccgatggagtccgcgttttcacagctcccgcgcctt
gttgttcgcgattcggcagttgatgcgctttgctcaggcgcgtttttggcgcgccctgga
ttggcaggttacaacaccaacattaaaaaaggagatttggttgccgttttctcgcaaaaa
ggtgaaatcatttctttgtcgattgcattgatgacgcccgaagaaatttccgaaaacgaa
ttcggatttgtcgcaaaaccgaaagcggttctgatggaaaaaggaatttatccggcggtt
tggaaaaatcggcaggcacgggaaaattgttttgtttcctctgttgaagaataa
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