Methanosarcina sp. WH1: MSWH1_0066
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Entry
MSWH1_0066 CDS
T03851
Name
(GenBank) Archaeal heat shock regulator, ArsR family
KO
K07721
ArsR family transcriptional regulator
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mef03000
]
MSWH1_0066
Transcription factors [BR:
mef03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
MSWH1_0066
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_Cmi2_C
PF0610-like_N
HTH_20
MarR_2
HVO_A0114
MarR
LexA_DNA_bind
HTH_24
TrmB
WHD_DprA
HTH_11
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AKB20337
LinkDB
All DBs
Position
81052..81744
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AA seq
230 aa
AA seq
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MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGMIEFSV
DDQRRKYFNIANNMRLEVSVSPYAYTMSLQDIDFDREKKGERSSVEKKETVARDESSCFF
LKLNGKLRELKERQEELVQMQKQLQVEYMELMDRCLDSIEEVARNPVECELLFELLKNEA
TPAVLCYNLRLHPSIITSNLMDLAERGFVEYTIKNNQQYWRICETGVDNK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggacccagcaaaactacttgacatcctggggaatgaaaaccgtagaaagataattcag
cttcttgcaaaccgcccctgctatgtcagtgaaatttcaggtaggctgggggtgggacca
aaggcgattatcagtcatctgagcctgttagaacaggcagggatgatcgagttcagtgtg
gatgatcagaggcgcaagtacttcaatattgcaaataacatgaggcttgaggtgtccgta
tcaccttatgcatatacaatgtctcttcaggacattgattttgacagggagaaaaaaggg
gaaagatcctctgtcgagaagaaagaaactgttgctagagatgaatcatcctgcttcttc
ctgaaactgaacggcaaactccgtgaacttaaagaaaggcaggaagaacttgtgcaaatg
cagaaacagctacaggttgaatatatggaactgatggacagatgcctggactcaattgaa
gaggttgccagaaatcctgtagaatgtgagctcctgtttgagcttctgaaaaatgaggct
acaccggctgtcctctgttataacctgcgtcttcaccctagcattataacgtctaacctt
atggatcttgcagaaaggggttttgttgaatacacaattaaaaataatcagcagtattgg
agaatatgtgagaccggagttgataacaaatga
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