Methanosarcina sp. WH1: MSWH1_0067
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Entry
MSWH1_0067 CDS
T03851
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mef
Methanosarcina sp. WH1
Pathway
mef04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSWH1_0067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mef03019
]
MSWH1_0067
03009 Ribosome biogenesis [BR:
mef03009
]
MSWH1_0067
04131 Membrane trafficking [BR:
mef04131
]
MSWH1_0067
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mef04147
]
MSWH1_0067
Messenger RNA biogenesis [BR:
mef03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSWH1_0067
Ribosome biogenesis [BR:
mef03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSWH1_0067
Membrane trafficking [BR:
mef04131
]
SNARE
SNARE associated proteins
Others
MSWH1_0067
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSWH1_0067
Exosome [BR:
mef04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSWH1_0067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
nSTAND3
Mg_chelatase
AAA_28
ABC_tran
AAA_17
Vps4_C
AAA_7
AAA_3
NPHP3_N
Sigma54_activat
IstB_IS21
NACHT
AAA_18
AAA_lid_PRS2_C
RNA_helicase
Zeta_toxin
ATP-synt_ab
DUF815
Parvo_NS1
AAA_24
TsaE
AAA_19
AAA_30
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AKB20338
LinkDB
All DBs
Position
81741..84005
Genome browser
AA seq
754 aa
AA seq
DB search
MTEEMNLRVAEAYHKDVGRGIARIDTRMMQQMDLVSGDIIEISGKSKTYAIVWPNVERGQ
ESRIRIDGNLRSNAKVGIDDKVTVQKVEAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTEIVIKEKSIEEIKTPEGISYEDIGG
LRREIQLVREMIELPMRHPELFQKLGIEPPKGVLLRGPPGTGKTMIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFEEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVVAQL
LSLMDGLQSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGVPDRKGRKQILLIHTRGM
PLEDEVNLGEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEDIPQEIIDNLVVTK
EDFREALKNIEPSAMREVYVEVLHVGWDDIGGLEGAKQELLESVEWPLKYPEMFKAVSIK
PPRGVLLFGPPGTGKTMLAKAVASESEANFISIKGPELLSKYVGESERAVRETFRKAKQS
APTVIFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP
ALLRPGRFDRLIYIKPPDKEGREKIFEIHTKEKPLAEDVNLSELAEMTEGYVGADIEGIC
REAAMLALREIVTPGIDRKYIQEKVGEVRISKKHFEKAIRRVKPTTSRETLSAYEKSAEL
FARYATDFEEESSEVKEQEKKSEEIGVPSFLPSE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaatgaatctgagagtagctgaggcgtatcataaggatgtgggtagggga
attgcaagaattgatacccgcatgatgcagcaaatggaccttgtaagtggagatattatt
gaaatctcgggtaaatccaagacttacgcaattgtctggcctaacgtcgagcgcgggcag
gagagcaggattcgaatagacggaaacctgcgcagcaatgcaaaagttggaattgatgac
aaagttacggtccagaaggtcgaggcaaaacatgcgcaaagggtcacacttgctccatcc
cagcctgtccggcttgtaggcggcgcccattacatcctgagaataatcgagggcagacct
ctgaacaaaggtcagcagatcagggttgaaactgtaaataatccccttactttcgttgta
gcatctacaagacccgcagggccggttgtcgtcactaaagacactgaaattgttatcaag
gaaaaatcaattgaggaaatcaagactccggaaggcatctcatacgaggacatcgggggg
ctcaggcgggaaatccagcttgtcagggaaatgattgagctgccaatgaggcatcctgaa
ctcttccagaagctgggaatcgagcctcccaaaggagtccttcttcgcggtcctcccgga
acgggcaagacaatgattgcaaaggcagtcgcaagtgaaactgatgccaatttcatcacc
ataagtggtcctgaaatcgtttccaaatattatggggaaagtgaacaaaagctccgtgag
atcttcgaagaggctgagaaggatgcaccttccattatcttcatagacgaaattgactcc
attgcccccaaacgcggtgaagtaaccggagaaatggaaagaagagtagttgcccagctg
ctttccctgatggacgggctccagtccaggggggaagtagtggtcatagctgccacaaac
cgcccgaattccattgacgaagctctccgccgcggcggaaggtttgacagggaaattgaa
ataggagttcctgaccggaaaggcagaaagcagattcttctgatccacaccagaggtatg
cctcttgaagatgaagtgaaccttggtgaaattgcagatgtgacccacggttttgtggga
gctgatctgtcctctctctgtaaggaagccgcgatgcatgcccttagaaggatcactcct
gaaatcgatatcgaagaggatatcccacaggaaatcattgacaatctggtggttacgaag
gaggacttcagggaagctctgaagaatattgagccttcagccatgcgagaagtctacgtt
gaagttctgcatgtgggctgggacgatataggtgggctggagggtgcaaaacaggaactc
ctcgagtctgtggaatggcccctcaagtatcccgaaatgttcaaggctgtcagtataaag
cccccgagaggggtgctgcttttcgggcctccgggtacgggcaagacaatgcttgcaaaa
gctgttgcaagtgagagtgaagccaactttataagtataaaaggccccgaactgctcagt
aaatatgtgggtgaatccgagcgtgcagtcagggaaacattccgaaaagcaaagcagtct
gctccgactgtaattttctttgatgagattgattcaattgctcctcaaagaagctctgtt
tccgatacccatgtctccgaaagagtggtaagccagatccttacagaacttgacggggta
gaggaactcaaggatgtgataatagttgctgctacaaaccggccggatatggtagaccct
gcccttctgaggcctggccgttttgacaggcttatttacatcaaaccgcctgataaagaa
ggcagggagaagatctttgagatccatacaaaagaaaaacctcttgcagaagacgtaaat
ctttccgaacttgctgagatgactgaaggatatgtgggtgcggatatcgagggtatatgc
agggaagcggcaatgctcgcgctcagggaaatagttaccccgggtatcgaccgaaagtac
atccaggaaaaggttggagaggtccggatttccaaaaaacacttcgaaaaagcaatccgc
cgtgtaaagcctacaacatccagagaaactctgagtgcttatgaaaagagtgccgaactc
tttgccaggtatgcaactgattttgaggaagaatcttcagaagtaaaagaacaggaaaag
aaaagtgaggaaataggagttccgagttttctgccttctgaatga
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