Methanosarcina sp. WH1: MSWH1_0079
Help
Entry
MSWH1_0079 CDS
T03851
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef00630
Glyoxylate and dicarboxylate metabolism
mef00710
Carbon fixation by Calvin cycle
mef01100
Metabolic pathways
mef01110
Biosynthesis of secondary metabolites
mef01120
Microbial metabolism in diverse environments
mef01200
Carbon metabolism
Module
mef_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSWH1_0079
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MSWH1_0079
Enzymes [BR:
mef01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSWH1_0079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB20350
UniProt:
A0A0E3NR47
LinkDB
All DBs
Position
96826..98112
Genome browser
AA seq
428 aa
AA seq
DB search
MRRDYIDRDYSPKDTDLICEFHIEPSAGVNFEEVATHMAGESSIDSWTEISTLSPELAVK
LKPHIFYLDEESQTVRVAYSEDLFELGSVPQVLSAVAGNIFSMKIVDNLRLQDIAFPRPM
LREFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLTSEKHAEVAYNSFAGGCDLVKDDE
NLTDQKFNGFDRRAELTLKFAEKAEVETGEKKMYLCNITAPTCKEMTRRLNVLKNLGASY
AMIDIVPVGWTALQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMVLVAKLCRLIGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDKVPADESQHVLTQDWGGLKPMFPVASGGLAPT
MIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALDASLEGVSMQDYAKDHKELEV
AIEKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagggactacatagacagggattatagcccaaaagacacagatctgatctgtgaa
ttccatatcgaaccgtcggcaggagtgaattttgaggaagttgccacccacatggcaggg
gaaagctctatagactcctggactgagatttccacattgagtcccgaacttgcagtaaaa
ttaaaacctcacattttttacctggacgaagaatcacagaccgtaagggtggcttactcg
gaagacctttttgagctgggttcggtcccccaggtgctgagtgctgttgcaggaaacatt
ttcagtatgaaaatcgttgacaacctcagactgcaggacatagccttccccaggccaatg
ctccgcgagttcaaaggtccgaacttcgggctgccggggatcaggaaacttgtgggggtg
caggaccggcctcttattgggactatcgttaagccaaaggtaggcttaacctctgagaaa
catgcggaagttgcttacaattcttttgccggaggttgcgaccttgttaaagatgatgag
aaccttaccgaccagaagttcaatggctttgacagaagggctgaactcaccctgaaattc
gcagaaaaagctgaagttgagaccggggagaagaagatgtacctctgcaacatcacagcc
ccgacctgtaaggaaatgacccggcgcttaaatgtcctcaaaaacctgggtgccagctat
gcaatgatcgatatcgtgccggtaggctggactgctcttcagactctgagggaagaggcc
gaagatgcgggtcttgcccttcatgcccaccgctgcatgcactcggcttatacccggaac
cctcgccatgggataagcatggttcttgttgccaagctctgcaggttgatagggcttgac
cagctccacataggtacggttgtcgggaaaatgcatggagaaaagcatgaagtcctgtct
ctaagggatgagtgcgtgcttgataaagtgcctgcggatgagagccagcatgtccttacc
caggactggggaggattaaagccaatgtttccggtagcgtctggagggcttgcccctaca
atgattcctgacctttactctatcttcggaaaagatgttattatgcagttcgggggtgga
atccatgcgcatccgatgggtacggtagccggagctactgcctgcaggcaagcccttgat
gcaagccttgaaggagtaagcatgcaggactatgcaaaggaccacaaagaacttgaagtt
gctatcgagaagtggcttaaaaaataa
DBGET
integrated database retrieval system
