Methanosarcina sp. WH1: MSWH1_0082
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Entry
MSWH1_0082 CDS
T03851
Name
(GenBank) Archaeal DNA polymerase II large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSWH1_0082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mef03032
]
MSWH1_0082
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSWH1_0082
DNA replication proteins [BR:
mef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSWH1_0082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PolC_DP2_central
PolC_DP2_cat
PolC_DP2_N
zf-DPOE
Gta3
TerY_C
HypA
Motif
Other DBs
NCBI-ProteinID:
AKB20353
LinkDB
All DBs
Position
99795..103247
Genome browser
AA seq
1150 aa
AA seq
DB search
MGETIASEEMHEYFNGLEARLKEAIEVANRARSRGGDPKPTVEIPLAKDLADRVENLIGV
KGVAAKIRELEVNMSREEAALEVGRQVAEGIVGSFPAKKDAVEAAIRVSMAVLTEGVVAA
PIEGIDKVDLGKNDDGSQYIRIFYSGPIRSAGGTAQALSVLVGDYVRRGIGIDRYKPRDE
EIERYVEEILLYKRVASLQYMPSEDEIRLIVRNCPVCIDGDPTEEAEVEGHRNLERIGTN
RVRGGMCLVLAEGLALKAPKVKKHVNKLKMDGWDWLETLIGGAKSGESAEDEQKNKIKPK
DKYIRDLIAGRPVFSHPSRPGGFRLRYGRSRNTSFASAGISPASMVLLDDFIANGTQLKV
ERPGKAAAMSAVDSIEGPTVRLFSGDLIRIDNIKEAYEVRPQVEVIVDIGEILINYGDFL
ENNHPLMPSPYVFEWWQYDYQAACPEQIPEDELKNPSAALALRLAEEFNVPLHPKFTYLW
HDINRNEFEALRNFVAEKGSFLAGEVAGAGVLKLPMKASLEEGIKPVLEKLLVLHRVKDD
EILIEEALPFILCLGLDPSLKEKASMPDLDDMVEAAGVLSGFKVYPRAPSRIGARMGRPE
KSDLRKMSPAAQVLFPLNNSGGITRNLVSASDYTSCMNGKIGEIEVELGLRECPACRKET
YFWRCECGEFTNPKLFCSRCKIDVRGAEVCPKCGRKPTSVANVKLDFRSIYKQAFENLGE
REKMGLIKGVKRLMNGQMTPEPLEKGILRSKHNVYVFKDGTIRYDMSDIPLTHIRADELG
ITAAKLLELGYREDICGNPLERDDQVVCLKVQDLVISYDGAEYMLRTAKYVDDLLVKYYK
IEPYYNAETIQDLVGVLLIGLAPHTSAGVLGRLIGFTKASVGYAHPFFHASKRRNCDGDE
DCIMLLMDGILNFSRSYLPDKRGGKMDAPLVLTTRIDPKEVDKEAHNIDVSARYPFEFYR
ATQEIKSPTELESIMDLISSRLGTPEQYEHFMFTHDTSNIAAGPLNSSYKTLGSMIEKME
AQLTLANRIRAVDASDVAERVLKSHFLPDLIGNLRSFSRQRMRCIKCGEKFRRPPLTGAC
PKCGGNVILTVHEGSVRKYLEISKEIGERYGVSSYTRQRIELLDYDISSLFENHRVKQLG
LSDFMSGSAR
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacgattgcaagtgaagaaatgcatgaatacttcaatgggctcgaggcaagg
ctaaaagaggcaattgaggttgcaaacagggcccgttcccggggtggagatccgaagccc
actgtggaaattccccttgccaaagaccttgcagatagggtagaaaaccttatcggggtc
aaaggagttgctgcaaagatccgggaacttgaggtcaatatgtccagggaagaagctgcc
cttgaagtcgggcgccaggtcgccgaagggattgtaggaagctttccagcaaagaaagat
gccgtggaagctgctatccgggtttccatggcggtcctgactgaaggggtagttgcagct
cctatcgaaggaatcgataaggtagatctcgggaaaaatgatgatggttctcagtatatc
cggatattttattccgggcctatcaggagtgcgggggggactgcgcaggcgctttccgtg
ctggttggcgactatgtgaggcgcgggatagggattgaccgctacaagccaagagatgag
gaaatagagcgctatgtggaagaaatcctgctttacaagagggtcgcaagccttcagtac
atgccttcagaagatgaaatccgtttgatagtcaggaactgcccggtttgcattgatggg
gacccgactgaagaagccgaggttgaagggcacaggaatcttgagaggatagggacaaac
cgtgtccggggaggaatgtgccttgtgcttgccgaaggtctcgccctcaaggccccgaag
gtcaaaaagcacgttaacaagttgaagatggatggatgggactggctggagacccttatc
gggggtgctaaaagtggggagagtgctgaagatgagcagaaaaacaagatcaagccaaag
gataaatatattcgtgacctgattgccgggaggcctgtgttttctcacccttcaaggcca
ggaggtttcaggctgcggtacgggcggtcaaggaatacttcctttgcttcggcggggatc
agtcctgccagcatggtcttacttgatgattttatagctaatgggactcaactcaaggtt
gaaaggcctggaaaagctgcagccatgtctgccgtggactccatagagggacctacggta
agacttttttcgggagatcttatccgtatagataatataaaggaggcatatgaagtccgg
ccacaggttgaagtaattgttgatattggggaaattctgatcaattatggggacttcctt
gaaaataatcatcctcttatgccttctccttatgttttcgaatggtggcagtacgattac
caggcagcctgccctgaacaaattcccgaggacgagctgaaaaacccgtcggctgctctt
gctctcaggcttgcagaggagtttaatgtgccattgcatccgaagttcacctatctctgg
cacgacataaaccggaacgagttcgaagctctcagaaactttgtggctgaaaaagggagt
tttctggcaggtgaagtggctggggcaggggtccttaaactgcccatgaaagcttccctt
gaagagggaataaagccggtgcttgaaaagctccttgtacttcacagggtaaaagatgat
gaaatccttatcgaagaggctcttccttttattttgtgccttgggcttgatccttccctc
aaagaaaaagccagtatgccagacctggatgatatggtggaagctgcaggtgttttaagt
gggtttaaggtttacccgagagctccttcaaggataggggcacggatgggaaggccagaa
aaatctgacctgcgcaagatgtctcctgcagcccaggtgctcttcccgttaaacaattcc
gggggaattacgcgaaatcttgtctctgcctccgactacacatcctgcatgaatggaaag
ataggggaaattgaagtagaattagggctgagagaatgccctgcctgcaggaaagaaact
tatttctggcgttgtgaatgtggagaattcacgaatcccaaacttttctgttctcgctgc
aagattgatgtaaggggtgctgaggtctgccccaagtgcgggagaaagccgacttctgtt
gcaaacgtaaaactggatttccgttccatttataagcaggcttttgagaacttaggggaa
agggaaaaaatgggtctgattaagggggtaaagcggctcatgaacgggcagatgaccccc
gagcctctggaaaaaggaatcctgcgttcaaaacataatgtctacgtttttaaggacggg
actatacgctacgacatgtcagatattcctcttacccatatccgggcggatgaactggga
attacggcagccaaacttctggaacttggttacagggaggatatatgtggaaaccctctt
gagagggatgaccaggttgtctgcctgaaggttcaggaccttgtgatatcttatgacggg
gctgagtatatgctgcgtactgcaaaatacgtggatgaccttcttgtgaagtactataag
attgagccctattacaatgctgaaactattcaggacctcgtgggggtactgctcataggg
cttgctcctcatacttccgcaggagtactcgggcgtctcatagggtttacgaaagcttcc
gtaggctatgctcatccttttttccatgcttcaaaacgcaggaattgtgatggggatgaa
gattgcataatgctccttatggatggaattctcaatttttcgaggtcatatctgcctgat
aaaaggggggggaagatggatgctcctctggtgctaactaccaggattgacccaaaggaa
gtggataaggaagcccataatatcgatgtttctgcgcgctatccttttgagttttacagg
gctacgcaggagatcaaaagccccactgaacttgaaagtattatggaccttattagcagt
cggcttgggacacctgagcagtacgaacatttcatgtttacacatgatacctcaaacatt
gctgcaggccctcttaattcttcatataagaccctaggaagtatgattgaaaaaatggag
gcccaactcaccctggctaacagaataagggcagtagatgcatcggatgtagctgaaagg
gtactcaagtcccatttccttccggacctgattgggaaccttcgttctttttccagacag
cggatgcgctgtatcaaatgtggggagaaattcaggcgtccgccccttaccggagcttgc
ccgaaatgcggaggcaatgtgatactaaccgtgcacgagggatctgtccgcaaatatctt
gaaatttcaaaagagattggagagaggtacggagtctccagctataccagacagaggatc
gagcttctggattatgatatcagctctctctttgaaaatcacagggttaaacagctggga
ctttcagattttatgtccgggtctgcgcgctga
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