Methanosarcina sp. WH1: MSWH1_0144
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Entry
MSWH1_0144 CDS
T03851
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mef03016
]
MSWH1_0144
Enzymes [BR:
mef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MSWH1_0144
Transfer RNA biogenesis [BR:
mef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSWH1_0144
Prokaryotic type
MSWH1_0144
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKB20415
LinkDB
All DBs
Position
169521..170330
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AA seq
269 aa
AA seq
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MRVALKLAYIGTEFHGSQIQPNVETVEKELFKALRNLRIIESPKSANYNCAGRTDAGVHA
LGQVVAFDTDKPNLAIPRVINSELPPSIWAWAHSEVPFDFDARRSAVSRHYRYVMSGGDY
DISKMREASKLLLGTHDFENFSRSNGEKSTVRTLERINVRVDGEITKIDVVGNSFLWNMV
RKIVTALSMIGKGVRDNDWLLQMLNPEIYEEGIEPAPPYGLTLMGVNYGENIEWIEDNYS
IKRAGEQNHKRILRHRVMAEVLEELISHE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgctttaaaacttgcatacataggcaccgagtttcatggatcccagattcaa
ccgaatgtcgagaccgtggagaaagaactcttcaaggctcttcggaatctcaggattata
gaaagccccaaatctgctaactataactgtgcgggtaggactgatgcaggggttcatgcc
ctcggacaggttgtagcttttgatacagacaaaccgaacctggcaattcccagagttatc
aactccgaacttcctccctccatatgggcatgggcccattctgaagtccctttcgacttt
gatgccaggaggagcgcagtttccaggcactaccgctatgtgatgagcggcggagattac
gacatttcaaagatgagagaagcttcaaaactgctgcttggaacccatgattttgaaaat
ttttccaggtcaaacggagaaaaaagtactgttcgtactctggagaggatcaatgttcgt
gtagacggggaaattacaaagattgatgtcgttggcaatagttttctttggaacatggta
agaaaaatagtgaccgccctctcaatgatcggaaaaggggtgcgtgacaatgattggttg
ctccagatgctaaaccccgagatttatgaagaaggaattgaaccggctcctccctatgga
ttaactcttatgggagtaaactatggagaaaatatagaatggattgaagacaattattca
atcaagcgggcaggtgagcagaaccacaaacgtattctcaggcacagggtaatggctgag
gtgctggaagaactgatctcccatgagtga
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