Methanosarcina sp. WH1: MSWH1_0449
Help
Entry
MSWH1_0449 CDS
T03851
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
mef
Methanosarcina sp. WH1
Pathway
mef02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSWH1_0449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mef02000
]
MSWH1_0449
Transporters [BR:
mef02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSWH1_0449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_7
AAA_29
Sigma54_activat
AAA_22
Mg_chelatase
NACHT
AAA_16
TsaE
NB-ARC
AAA
ResIII
Parvo_NS1
IstB_IS21
WDR18_C
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AKB20720
LinkDB
All DBs
Position
complement(516033..517022)
Genome browser
AA seq
329 aa
AA seq
DB search
MNTLLEIKDLNVSFQGNENENKTGNKNETVAAVSCLSLSIREKETVALVGETGCGKSVVA
HAIMRLLPPESRVKGRIEFGGKNLLELSEKEMAKLRGKEISIIFQNPSLALNPVYSIGHQ
LAEPLRIHGQEKEEVKGKKKTKALSKVVEALKRVGFSNPQEYMGYYPSWCSGGMNQRFLI
AASTMLDPVLLIADEPSKGLDRSRVAELENELKGLKEKSETSLLLISHDLGFVRQIADRV
AVMYAGEIVEIATPSTLFESPLHPYTQGLLNSLPENGFVPIPGSSPPLSSPPAGCRFHPR
CPSKEKRCTQEHPELKEGNGRAVRCFLCP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgctggaaataaaagacctcaacgtttcttttcagggaaatgagaatgag
aataaaaccgggaataaaaacgaaaccgtggccgctgtttcctgcctttcgctttctata
agggaaaaagaaactgtggctctcgtaggggagacgggctgcggaaaatccgttgtcgca
catgcgattatgcgtctgctccccccggaatccagagttaaagggagaatagaattcgga
ggcaaaaacctcctcgaactgagcgaaaaagagatggcaaaactcaggggaaaagaaatc
tccatcattttccagaatccgtctcttgctttaaatcccgtatattcaatagggcaccag
cttgcagaacctctccggattcacggacaggaaaaagaggaagtgaagggaaagaaaaaa
actaaagccctatcaaaagtcgtggaagcccttaaacgagtgggtttttcaaatccccag
gaatacatgggttactatccctcctggtgttccggagggatgaaccagcgctttttgatt
gcggcttcaaccatgcttgacccggtcctccttatagcagacgaacccagcaaagggctc
gacaggagccgcgtagccgaactggaaaacgagctgaagggactgaaagaaaaaagtgaa
acatccctgcttctgataagccacgacctcggttttgtgcggcagatcgcagatagggtt
gccgtaatgtatgcgggagaaatcgttgagattgccaccccatcaaccctttttgaaagc
ccgctccacccctatacccagggcctcctgaacagcctgcctgaaaacggttttgtaccc
atacccggttcatccccacccctcagcagcccgcctgcaggctgcaggttccatccgaga
tgcccctccaaggaaaaacgttgcacgcaggaacaccccgaactcaaagaaggaaacgga
agggcagtgaggtgttttttatgtccctga
DBGET
integrated database retrieval system
