Methanosarcina sp. WH1: MSWH1_0640
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Entry
MSWH1_0640 CDS
T03851
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mef03000
]
MSWH1_0640
Transcription factors [BR:
mef03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSWH1_0640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
MerR
HTH_11
MerR_1
HTH_26
HTH_Crp_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AKB20911
UniProt:
A0A0E3L451
LinkDB
All DBs
Position
complement(757259..758245)
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AA seq
328 aa
AA seq
DB search
MTKEVLIHQIIDVLSRAGFALSDRCNIRPRSFDVAARKDETLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQLLEDSVVYMRYDILALSVQTLHDYFVENIQPLVSAAP
GGLYVSIEGDLLKKARTDHSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFR
IELARPIDILKSCGSRKPRKKAESEKEEPQAKKNVLLPEDLILNTISMLGYDVLHTAQAP
FKAISRDKSSVILTGVSEFNTTVIKRAHLMSSLSCITETQSVFIINGRSKLKSVENTVLI
EKKELDNISDSQELLDFIEERKETRDGT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagttctcatacatcaaattattgatgtattatcacgtgcaggttttgca
ctctctgatcgttgtaacatacgccccaggagctttgacgttgccgcacgtaaagatgaa
acactattactttgcaaggttttatttaacattgacggcctgaacgaagaaacagcaagg
gagatgaaatatcttgctgagtatctcggaggttccgctatcgttgttggagccaaaaca
agggaccagctgcttgaagacagtgttgtctacatgcgctatgatatccttgcccttagt
gtccagaccctccatgactactttgtcgaaaatatccagcctctagtttcagcagcacct
ggagggctttatgtctcaatagaaggagatctcctgaagaaggcaaggacggaccattcc
atgtctcttgggaccctggcttccatggtgggagtttcgagaaggactatcagcaaatat
gaagaagaaggcatggatgcatccattgatgtagttctccagcttgaagatattttccgg
atcgaactggcaaggcccatagatatcctgaaatcctgcgggagcagaaagccaaggaag
aaagcagagtctgaaaaggaagaaccccaggcaaaaaagaatgtacttttgccggaagac
cttatcctcaatacgatttcaatgctcggatatgatgtccttcatactgcacaggcacct
ttcaaggctatctcaagagacaagtcttcagttatccttacaggggtcagcgagtttaac
acaacagtaatcaaacgggctcatttgatgagcagcctctcctgtattacagaaactcag
tccgtgttcattattaacgggcgatctaaactgaagtcagtcgaaaatacggtgctgata
gaaaagaaagaacttgacaatataagtgattctcaggagcttcttgatttcatagaggag
cgcaaggaaactcgggacggtacataa
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