Methanosarcina sp. WH1: MSWH1_0653
Help
Entry
MSWH1_0653 CDS
T03851
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSWH1_0653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mef03400
]
MSWH1_0653
Enzymes [BR:
mef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSWH1_0653
DNA repair and recombination proteins [BR:
mef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSWH1_0653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF6005
Motif
Other DBs
NCBI-ProteinID:
AKB20924
LinkDB
All DBs
Position
771874..772707
Genome browser
AA seq
277 aa
AA seq
DB search
MPSETLFFGTAGVPRSAKASNSPAGIERVRELGLDCMELEFVQGVRMSEKGAGKVLETAG
RENVALSVHAPYYINLNSPEEEKLKASMERIYQAARIGSLCGAESIVLHAAFYQKSSKQA
AYENVSKALRELTEQLRGEKIPAVLRPETMGKRSQFGTLEEVLALSEEIEGVMPCLDFSH
MHAREGKENSYPEFTTILSKVEDVLGKEGLANMHMHVSGIEYDKNGEKRHLPLKESDFNY
PELLKAFKEFKVWGRVICESPILEEDALLLKKTYSKL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgaaacacttttttttgggactgccggagttcccagaagcgcaaaagccagc
aatagccctgcaggaatcgagcgggtcagggaactggggctcgactgcatggagctcgaa
ttcgtgcagggggtgcgcatgagcgagaaaggggcaggaaaggttctggaaacggccggg
agagaaaacgtagccttgagcgtacatgccccttactacatcaacctgaactctccggaa
gaagagaaattaaaagccagcatggaaaggatttaccaggctgcaaggataggcagcctc
tgcggagcagagtcgatcgtactgcacgcagcattttatcagaagagcagcaagcaagcc
gcttatgagaatgtctcaaaggccctccgagaacttacagaacagctcaggggagaaaag
atacctgcagtcctccgtcctgagaccatgggcaagcgttcccagtttggaacccttgaa
gaagtgcttgccttaagcgaagaaatcgaaggggttatgccctgcctggacttttcccac
atgcacgcaagagaagggaaagaaaactcctatcccgagtttacgacaatcctttcaaaa
gtagaagatgttcttggaaaggaagggcttgcaaacatgcacatgcacgtctcgggaata
gaatatgacaaaaacggggaaaagagacatctgcctcttaaagaatcagactttaattat
ccagaacttttaaaagcctttaaagaattcaaagtatgggggcgagtcatttgcgaaagc
ccgatcctggaagaagatgcgcttctgttaaaaaaaacttatagcaaactttaa
DBGET
integrated database retrieval system
