Methanosarcina sp. WH1: MSWH1_0687
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Entry
MSWH1_0687 CDS
T03851
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mef03016
]
MSWH1_0687
Enzymes [BR:
mef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSWH1_0687
Transfer RNA biogenesis [BR:
mef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSWH1_0687
Prokaryotic type
MSWH1_0687
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKB20958
UniProt:
A0A0E3KWN1
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All DBs
Position
complement(811539..812555)
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AA seq
338 aa
AA seq
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MSSAGKLPSEVERTLVRKSGAWTNPSYGCPPEKRPILEYIEKGVVNIDKPSGPTSHEVAA
WVKAILGVKTAGHAGSLDPKVTGLLPTLLGKATKAVPALRLSGKEYVCHLKLHRVMPPKL
IRQVCEEFTGPIYQRPPIKSAVKRVIRVRTIYYIEVLEIEGTSVLFRVGCEAGTYIRKLC
HDIGLALGCGGHMQGLRRTKAGPFTEKTLVTLHELKDAYVFWEEDGDESELRRVIRPMES
AVSHLPKIILRDSAVDAVCSGASLAVPGITSLDSNLIIGGLTGLFSLKGELVALAKADMT
TEEILKASAGIAASPIRILMEAGTYPKGWTKKEEKVQL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgccggcaaactgccatcagaagttgaaagaacccttgtccggaagtccggc
gcctggacaaatccatcctacggctgtcctccggaaaagcgccctatccttgaatacatt
gaaaaaggagtggtgaatattgacaagcccagtggacctacaagccacgaggttgcagcc
tgggtaaaagccatccttggcgtgaagacagcaggacatgccggttctcttgatcctaag
gtcacagggcttttgcctaccttgctgggaaaagctacaaaagccgtacctgccctgcgc
ctctcaggaaaagagtatgtttgccatctgaagcttcacagggttatgcctccaaagctg
attcgccaggtctgtgaggaatttacaggccctatttaccagaggcctcccatcaaatca
gctgtaaaacgtgtcataagggtaaggacaatctattatattgaagtgcttgaaatcgaa
ggcacttccgtgctcttccgcgttggatgcgaagcagggacttatataaggaaactctgc
cacgatatcgggcttgctctgggctgcggcgggcatatgcagggactccgcaggactaaa
gcaggcccgtttacggaaaaaacccttgtaacgctccatgaactcaaagacgcctatgtg
ttctgggaggaagatggtgatgagtccgaactgagaagggttatccggccaatggaatca
gctgtatcccacctacccaaaataatcctgcgggacagtgcagtagatgcggtttgttcc
ggtgcttccctggcagtcccgggtattacaagcctggactccaacttgatcataggggga
cttacagggcttttttccttaaaaggggaacttgtggctcttgcaaaggctgatatgaca
accgaagagattctcaaagcttctgccggtattgcagcttctcctatccgcatacttatg
gaagcagggacttatccaaaaggctggactaaaaaagaagaaaaagtccagctttaa
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