KEGG   Methanosarcina sp. WH1: MSWH1_1170
Entry
MSWH1_1170        CDS       T03851                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mef  Methanosarcina sp. WH1
Pathway
mef03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSWH1_1170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mef03032]
    MSWH1_1170
DNA replication proteins [BR:mef03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSWH1_1170
SSDB
Motif
Pfam: AAA RCF1-5-like_lid RuvB_N AAA_22 Rad17 AAA_14 AAA_assoc_2 AAA_16 AAA_6 nSTAND3 AAA_24 IPT AAA_30 DNAX_ATPase_lid AAA_7 RNA_helicase AAA_33 KinB_sensor DUF1798
Other DBs
NCBI-ProteinID: AKB21441
UniProt: A0A0E3L4F7
LinkDB
Position
1397798..1399603
AA seq 601 aa
MVWFKMMSAIEWAEKYRPRTLGDVVGNKKAVQDFRVWAEEWQSGIPERRAVILYGPAGIG
KTSSAHALGRDLDWEVIELNASDQRTAGVIEKVAGSAASMNTFFGGKRLIILDEADNIHG
TSDRGGMRAIAGIIKATLQPIVLIANDIYGLTPTIRNLCLEIKFGSLQSRSMVPALKKVC
EAEGVYCSQEAVLQIAENAGGDFRSAMNDLQAAANGKQALEVEDIGTAGRDVKENIFKVM
QKIFKSTDCKKALESARGLDESPEDLVHWIDENLPIQYACKDGGLEDIRMGFGYLSKADL
YLGRVKKRQNYRMWRYASMLMVCGAALSKTRSYPGFIKYQQPSLWRRLGQTRSKRDMRDN
IASKIGEHSFESMHYSRNNLLGFYSRMLKDEKSAVEVTANLGLELEELMYLTGSAKASKK
LQKIYDEAQKLLDESKDKTEEPNFFKVSAPAVDNKQRTLSCPAVILEDEKGTQKRVQAGK
SEASDSQPSEAGQKTLLMGFDTPSEIHEKKETSGNMLPEGPKPAENNFFSFSTPLPEKKP
VSKSVEKNISSISSKKKALANSDPSKQRISDEASTSAGMQDSTGKVLKKAEPKNQKTLFD
F
NT seq 1806 nt   +upstreamnt  +downstreamnt
ttggtatggtttaagatgatgtcggcaatcgaatgggctgaaaaataccgaccccggacc
ctcggagatgtcgtggggaacaagaaggcagtgcaggatttcagggtatgggctgaggaa
tggcaatccgggattcctgagagaagggcagtgatactctatgggcctgctgggataggg
aagacttcaagtgctcatgcgcttggcagggatctggactgggaggtcattgaactcaat
gcaagtgaccagaggactgcaggtgttattgagaaggtcgctggttctgcagcgtcaatg
aatactttttttggtggaaaacgtcttattattcttgatgaggcggacaatatccatggg
acttcggataggggtggaatgagggctattgccgggatcataaaagccacactccagcct
atcgtgcttattgcgaatgacatttatgggttaacccctacaatcaggaatctatgcctg
gaaataaagttcgggtctttgcagagccgttccatggtccctgctttgaagaaagtttgt
gaggctgagggagtttattgcagccaggaagctgtcctgcagatcgcggaaaacgcgggt
ggagatttcaggagtgccatgaatgacctccaggctgcagcgaacgggaagcaagcgctc
gaagttgaggatatcgggactgcaggcagggacgtcaaggagaatatctttaaggtgatg
cagaagatctttaaaagtactgactgtaaaaaagctcttgaatctgcacgcgggcttgat
gaaagtcctgaggacctcgtgcactggattgatgaaaatttgcctatccagtatgcctgc
aaggacgggggcctcgaagatataaggatgggttttggttatctttcaaaggctgacctt
tatctggggcgtgtaaaaaaacgccagaattacaggatgtggaggtatgccagcatgctt
atggtctgcggagctgctctttcaaagacaaggtcgtatccgggctttatcaaataccag
cagccttcactctggagaaggctcgggcagacacgttcgaagcgggatatgcgagacaat
atcgcttcaaaaatcggggagcacagctttgagtcaatgcattattcgaggaacaacctt
ctagggttttactcgcgaatgttgaaggatgagaaatctgcagttgaagttactgcaaac
ctcgggcttgagcttgaagagctaatgtaccttacaggaagtgcaaaggcaagtaaaaag
ctgcagaaaatttacgacgaggcgcagaaacttctcgatgaaagcaaggataagaccgaa
gagccgaatttttttaaagtttctgcccctgcagtagacaataaacagagaactctcagc
tgccctgcagtaattctggaggacgaaaaggggactcaaaagagggtccaggccggtaaa
tctgaagcttctgattctcagccttcggaagccgggcagaaaacccttcttatgggattt
gacacaccttcggagattcacgaaaaaaaagagacttcagggaatatgctgcctgagggt
ccgaaacctgcagaaaataatttcttctctttttccactccccttccagaaaagaaacct
gtttctaaatctgtagagaagaatatctcttctatatcttcaaaaaagaaggctctagct
aacagtgacccatcaaaacaaaggatatctgatgaagcttcaacctccgcaggtatgcag
gatagcacaggaaaagttttgaaaaaagctgagcctaaaaaccagaaaacacttttcgac
ttttaa

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