KEGG   Methanosarcina sp. WH1: MSWH1_1222
Entry
MSWH1_1222        CDS       T03851                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mef  Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:mef00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mef02048]
    MSWH1_1222
Enzymes [BR:mef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     MSWH1_1222
Prokaryotic defense system [BR:mef02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   MSWH1_1222
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N DUF4145 Helicase_C HSDR_N_2 SNF2-rel_dom SLFN-g3_helicase T1R_D3-like AAA_19 BRE1 SAM_KSR1 Snapin_Pallidin
Other DBs
NCBI-ProteinID: AKB21493
UniProt: A0A0E3KX05
LinkDB
Position
1471538..1474978
AA seq 1146 aa
MTNFAFLEAEWPSLYEAAIKASNAVYPDPRTACFYTRRALELTVQWMYKHDYSLLLPYQD
NLSALIHEPTFKKAAGEAIFNKARVIIRLGNQAVHSNSSVLVDDSITAVRELFHISYWLA
RTYAREGKPEPGLSFNPEDLPKTTVPKQTIEQLQNLETSLREKDEKLSELLADKSALDEE
LKRLRVEVAKAKEASALLPDTHDYSEAETRDYFIDMLLKEAGWALDQARDREFEVSGMPN
KKGIGYVDYVLWGDDGKPLALVEAKRTKRDPRVGQQQAKLYADCLENQFGQRPVIFYSNG
YETWIWDDSRYPPRQVQGFYKKAELELLIQRRSSRRPLSEAEINSAIVDRYYQTRAIRRI
GEAFEQDNDRKALVVMATGAGKTRTVIALCDLLMRCNWVKRVLFLADRVALVNQAVNAFK
RHLSDSAPVNLVTEKYTEGRVFVSTYPTMMKQIEEMSNGQRRFGVGHFDLVIIDEAHRSV
FKKYRAIFDYFDSLLVGLTATPKNEIERNTYSLFDLETGVPTDAYHLEEAVKDGFLVPPK
AVSVPLKFQRQGINYDELSDEDKEQWDTLEWDDEDGEIPARVEAEAVNKWLFNKDTVDKV
LAHLMERGLKVVGGDRLGKTILFAKNQAHAEYIADRFNANYPHFKSEFARVITFKTEYAQ
SLIDNFSIKEKNPHIAISVDMLDTGIDVPEVVNLVFFKMVRSKTKFWQMVGRGTRLCPDL
FEPGKNKQFFYLFDYCQNLEFFSQNPETTDGSLGDSLGTRLFKSRLELISELDRKLEADI
EFGVGAETLEIYGEPKTEAEVRRSIAKMLHSEIASMNLDNFVVRPRRRLVEKYSRPETWL
KLSREDLSELSHEVAGLPSELQPEAEEAKRFDLLVLNLQLALLRAEPAFERLRNQVRDIA
GLLEEKTTIPMVRDQMNLILDVQTEEWWENVTTPMLETLRRRLRDLVKLIEKHRRKPIYT
DFEDEMGSETDVELPGFAASGDFEKFRAKTRAFLLEHQDQAVIHKLRMNEPLTASDLDEL
ERILSESGLGGPEEIARAKEVSHGLGLFVRSLVGLDREAAKQALATFLLGKTFSANQIEF
INLIINHLAKHGVMDAALLYESPFTDLTTQGPDGLFTSTQIDELISALEQIKATALASPV
SQQTTA
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgaccaattttgcctttctcgaagccgaatggccttctttgtatgaggcagccataaaa
gcctcaaatgcagtttatcctgacccgcgaactgcctgtttttatactcgcagggctctg
gaactgactgtgcagtggatgtataagcacgattattccttgctcctgccgtatcaggat
aatttgagtgctcttattcatgaacctacattcaagaaagctgcgggagaggcaatcttc
aacaaagcaagggttattatccggcttggaaatcaggctgtgcacagcaacagttcagtc
ctggtggatgattcaataacagcagtgcgtgaacttttccacatcagctactggctggca
cgcacctatgcaagagaaggaaaacctgaaccgggactgagctttaaccctgaagatctg
ccaaaaacaactgtcccgaagcagacgatagaacagctccagaacctggaaaccagcctg
cgggaaaaggacgaaaaactctcggaactgcttgccgacaaatccgcgctggatgaagaa
ctcaaacgcctgcgggttgaggttgcaaaggcaaaagaagcttcagctttactgccggac
acccatgattattccgaagctgaaacccgggactacttcattgatatgctacttaaagag
gccggctgggctctggatcaagctcgggacagggaatttgaagtctcaggcatgccgaac
aaaaaaggcatcggctatgtagattatgtgctctggggcgacgacggaaaaccccttgcc
ctggtagaagcaaaaagaaccaaacgcgatcctcgggttggccagcagcaggcaaaactc
tatgctgactgcctggaaaaccagttcgggcaaaggccggttatcttctactcaaacggg
tatgaaacctggatctgggacgattccagatatcctccaaggcaggtgcagggcttctac
aaaaaagccgaactggaactcctcatccagcggcgtagcagccgcagacctctctccgaa
gcagagattaattccgccatcgtcgaccgctactatcagacccgggccatccgtcgcatc
ggagaagcctttgaacaggacaatgacagaaaagctctggttgtaatggcaacaggcgcc
ggcaagacccgcacagtcattgcactctgtgacctcctgatgcgctgcaactgggtcaaa
cgtgtgctcttccttgccgacagggtggctctggtcaaccaggcggtaaacgccttcaag
cgacacctttcagactcagcccctgtgaaccttgtcacggaaaaatatacagaagggcga
gtgttcgtttcgacctatcctacgatgatgaaacagatagaagagatgagcaatggacag
cgccgctttggagttgggcatttcgaccttgtaattattgacgaggcgcaccgctcggtt
ttcaagaaatacagagctattttcgactactttgattctctccttgtgggccttacagca
acgcccaaaaatgaaattgaacgcaatacctacagcctctttgacctcgaaacaggtgtt
cccaccgatgcctaccatctggaagaagctgtaaaagacggatttttagtccctcctaaa
gcggtttcagtgcccctgaagttccagcgccaggggatcaattatgacgagctctcagat
gaagataaagaacagtgggacactcttgagtgggacgacgaagacggcgaaatccctgcc
agggtagaagccgaagccgtcaacaaatggctgttcaataaggacactgtggacaaagtg
ctcgcacacctgatggagcggggcctgaaagtcgttggtggggaccggttaggcaagacc
atcctttttgccaaaaaccaggcacatgctgaatatatcgccgaccggttcaatgccaat
taccctcatttcaagagcgagttcgcccgtgttatcactttcaagactgaatatgcccag
agcctgatagataatttctcgatcaaggaaaaaaaccctcatattgccatctcggtggac
atgcttgacaccggaattgatgtgccagaggtcgtgaatctggtcttctttaaaatggtg
cgttcaaagacaaagttttggcagatggtgggacgcggtacccggctgtgtccggacctt
tttgaaccgggaaagaacaaacaattcttttatctttttgattactgccagaacctggag
ttcttcagccagaacccggaaaccaccgatggttcactgggtgattcgcttggcacacgt
ctgttcaaatcccggcttgaattaatttctgagctggacaggaaacttgaagctgacatc
gaattcggagtcggcgcggagaccctggaaatctatggtgaaccaaaaacagaagctgaa
gttcgccgctcgattgccaaaatgctgcacagtgaaattgcctcgatgaatctggacaac
ttcgtcgtgcgtcccaggcggcggctggtcgagaaatactccaggcccgaaacctggcta
aagctgtccagggaagacctctccgaactttcccatgaagtcgcaggcctgccctcggaa
ctgcaaccggaagccgaagaagcaaagcgctttgacctcctggtcctgaacctgcagctg
gctttactgcgtgccgagcccgcctttgagcgcctgcgtaaccaggtaagagatatcgcc
gggcttctggaagaaaaaacgactatcccaatggtgcgtgaccagatgaatctaattctg
gatgtgcagaccgaggaatggtgggaaaacgttacaactcccatgctggaaacgcttcga
cggcgtctccgtgacctggtaaaactgatagaaaaacaccgcaggaagcctatttatacc
gactttgaagatgaaatgggcagtgaaaccgacgtagaattgccaggctttgctgcatcc
ggagatttcgagaagtttcgcgccaagacaagggctttccttctggaacatcaggaccag
gccgtaattcataagctcaggatgaatgagccactaactgcatctgatctcgatgagctg
gagcggatactctctgaaagcggattgggaggcccggaagaaattgcccgtgccaaagag
gtatcacatgggcttggcctctttgtacgttcactggtagggttggatagggaggctgca
aaacaggcgcttgccacattcctcttaggcaagacttttagtgcaaaccagatcgaattc
ataaacctgatcataaaccatcttgcaaaacacggtgtgatggatgctgcactgctttac
gaatcaccatttactgaccttacaacgcaagggcctgacggactcttcacctcaacccag
atagatgagctgatatccgcactggagcagatcaaggcaacagcacttgcatctccggtt
tcgcaacaaaccacagcttga

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