Methanosarcina sp. WH1: MSWH1_1269
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Entry
MSWH1_1269 CDS
T03851
Name
(GenBank) Translation initiation factor 2
KO
K03243
translation initiation factor 5B
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mef03012
]
MSWH1_1269
Translation factors [BR:
mef03012
]
Eukaryotic type
Initiation factors
eIF-5
MSWH1_1269
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D4
IF-2
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Dynamin_N
EF-G_D2
WHD_F93
Roc
Motif
Other DBs
NCBI-ProteinID:
AKB21540
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Position
1540378..1542153
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AA seq
591 aa
AA seq
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MTDKKNLRTPIVCVMGHVDHGKTTLLDKIRGTAIVSGEAGAITQHIGATEVPIDVIVDKL
GDPRLRERFMVPGLLFIDTPGHHAFTTLRSRGGALADLAIVVVDINEGFKPQTYESLQIL
KRFKTPFVVVANKIDRIGGWVPQKNMPFAATFKKQSGDVQARLETKLYEVIGELYNQGFA
AERYDRVTNFQNTLGVVPVSAFTGEGIPDVLMVLLGLAQRFLEANLQYSAKGPGVGTVLE
VKEEKGLGATLDVILYDGTLKKGDTVVIGSLGEPIQTKVRALLKPRELSEIRYESKFQQV
KKVTAAVGVKISAPDLEGALAGAPIRVATEETLEEIVAQVKSEIDEVRIDTGSVGIMIKA
DTLGSLEALVHEFQKDEVPIRKAEVGDISHRDAIEASTVEDPLYSVLIGFNVKVHPDARD
FLQESSVKVFTNNVIYRLIEDYEKYVKEQQELAEKKIFETIIRPGKFKILPGCVFRQSKP
AVVGVRVLGGVVRTNAEVMLENGNVVGKIKGLQSDGENIPSARVGKEVAMAIDGATVGRQ
IKEGDVLYMNVPERHAKVLEHEIYNSLSTDEKETFDIFLGLKRKDNPFWAK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagaaaaatctcaggactcctatagtctgcgtgatggggcacgtcgaccac
gggaaaaccactctgctcgacaagatcaggggtactgcaattgtcagtggagaagctggg
gcgattacccagcatatcggagctactgaagttcctatagacgtgattgtcgacaagctc
ggagatccaagattaagggaacgcttcatggttccggggctgctttttattgatactccg
ggacaccatgcctttacaaccctcaggagcaggggaggcgctcttgccgatcttgcaatt
gttgttgttgatataaatgaaggttttaaaccccagacctacgaaagcctgcagatctta
aaaaggttcaaaactccttttgttgtcgttgccaacaagatcgacaggatcggcggctgg
gttccacagaagaacatgccttttgcagctaccttcaaaaagcagtcaggggatgtccag
gcacggcttgaaacaaagctctacgaggtaataggtgaactctataaccagggctttgca
gcagagcgttatgaccgggttacgaatttccagaacactctgggcgtagtccctgtaagt
gcttttacaggggaaggcattcctgatgtcctcatggtgcttttaggtcttgctcagagg
ttcctggaggcaaaccttcagtacagtgccaaaggcccgggagtagggactgtccttgag
gtaaaggaagaaaaaggcctcggagcaaccctcgacgttattctctacgatggcacatta
aagaaaggagatacggttgttattggaagcctgggcgagcctatccagacaaaggtaagg
gctcttttaaagccaagggaactttccgaaatccgttacgagagcaagttccagcaggtt
aagaaggtcactgctgcagtcggtgtgaagatctcggctcctgacctggaaggcgcactt
gcaggcgctcccataagggttgcaacggaagaaacccttgaagagattgtagctcaggta
aagtctgaaatcgatgaggtcaggattgatacgggttcagttgggataatgattaaagca
gatactcttggctcccttgaagcccttgtccacgagttccagaaagatgaagtccctatc
aggaaagctgaagtaggagacatctcccacagggacgcgattgaggcttcaacagttgaa
gaccccctttattctgtgcttataggtttcaatgtaaaggttcaccctgacgccagagat
ttcctgcaggaaagcagtgtaaaggtattcacaaataatgtgatctaccgcctgattgaa
gattatgagaaatacgtaaaggaacagcaggaactggctgaaaagaagattttcgaaacg
ataattcgccccggaaagttcaaaattcttcccggatgcgtgttccgccagagcaaaccc
gccgtcgtcggggtaagggttcttggaggagtcgtgcggacaaatgcagaggtcatgctt
gaaaacgggaacgttgtgggtaagatcaagggtctgcagtccgatggagaaaatattcct
tctgcaagggtaggcaaagaagttgcgatggctattgacggtgcaaccgtaggcaggcag
atcaaagaaggagacgtgctctatatgaacgtgcctgagaggcatgccaaagtccttgag
cacgaaatctacaattccctttcaaccgatgaaaaggaaacttttgatattttccttgga
ctcaaacgaaaagataatcctttctgggcaaagtaa
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