Methanosarcina sp. WH1: MSWH1_1371
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Entry
MSWH1_1371 CDS
T03851
Name
(GenBank) tRNA pseudouridine 55 synthase Archaea
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mef03016
]
MSWH1_1371
Enzymes [BR:
mef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSWH1_1371
Transfer RNA biogenesis [BR:
mef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSWH1_1371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
AKB21642
UniProt:
A0A0E3NT53
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Position
1666773..1668068
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AA seq
431 aa
AA seq
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MDVLEISKKILHEGPVCDHCMGRQFAKLSTGLSNRERGQAMKLALVLEGDRIYKSENDDS
LLKELVPCSALARKTLRIEGEDEQCWVCLDQFKKLDEWADKAAKALEGLEYSTFLVGTKV
SGLLSENEEMLWAEAGTAYAEQLKTELNREVGKRIAEKVDKEVDFENPDIVITLDLATTN
FELQVRSVYVYGRYLKKVRGIPQTRWPCRKCKGRGCESCGFTGKQYPESVDELIKGPVIE
TFEAVDTAFHGSGREDIDALMLGNGRPFVVEAKSPVKRMADLEMLTALINENAAGKVEVR
DLRFVEKSMIEILKSSKADKTYKLKVTFKEPVSEEKLKSCLESLSGTEIAQQTPKRVVHR
RADLVRKRHVHSITLDELTDNGHAHITVNCEGGLYVKELISGDEGRTNPSLTGLLGVPAL
VEDLDVVNVEI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacttgaaatttcaaaaaagattctgcacgaaggtcctgtctgtgaccactgc
atgggccgtcagtttgcaaaattatccacaggcctcagcaacagagagcgcgggcaggca
atgaaactcgcccttgtccttgaaggggaccgcatttacaaaagtgaaaatgatgattct
ctcttaaaggaacttgttccctgcagtgcccttgcaaggaaaactctcagaatcgagggt
gaagacgagcagtgctgggtctgccttgaccagttcaaaaaactggatgaatgggcagat
aaagctgcaaaagccctcgaagggcttgagtactccaccttcctggtggggacaaaggtc
agcgggctcctgagtgaaaacgaagagatgttatgggctgaggcagggactgcctatgcc
gagcagttaaagaccgaacttaaccgggaagtaggcaagcggattgcagaaaaggttgac
aaagaagtggattttgaaaacccggatattgtgatcacccttgaccttgcaacaaccaac
ttcgaacttcaggtccgttcagtatatgtttacggacgctacctcaaaaaagttcgcgga
atcccgcagacccgctggccctgcaggaaatgtaagggtagaggctgtgagagctgcggg
tttaccggcaaacaatatccagaatccgtagatgagcttatcaaaggtcccgtcatcgaa
acatttgaggctgttgatacggcttttcacggttcgggaagggaagatatagatgccctg
atgctcggaaacggcagaccctttgtggtagaagcaaaatcccctgtaaagcgcatggct
gaccttgaaatgcttactgccttaattaatgagaatgctgcaggaaaagttgaggtaagg
gatcttcgctttgtagaaaaaagcatgattgagatcctgaagagctcaaaggcggataaa
acttataagcttaaagttacatttaaagagcctgtttcagaggaaaagcttaaatcctgc
cttgagtctttgagtggtacggagatcgctcagcagactccaaagcgtgtggttcacagg
cgggcagatcttgtccggaaaaggcacgtgcacagcattacgcttgacgagctgacagat
aacggtcatgcccacataaccgtaaactgtgaaggtgggctgtacgtcaaagagctgatt
tccggggacgagggcaggacaaacccgagcctgacagggcttttaggagtcccggcgctt
gtggaagatcttgatgtagttaacgtcgaaatttaa
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