Methanosarcina sp. WH1: MSWH1_1450
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Entry
MSWH1_1450 CDS
T03851
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03410
Base excision repair
mef03430
Mismatch repair
mef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSWH1_1450
03430 Mismatch repair
MSWH1_1450
03440 Homologous recombination
MSWH1_1450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mef03400
]
MSWH1_1450
DNA repair and recombination proteins [BR:
mef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSWH1_1450
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSWH1_1450
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSWH1_1450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB21721
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Position
complement(1757770..1758753)
Genome browser
AA seq
327 aa
AA seq
DB search
MKELQNHLKAKTLILTHGDSDGICSGAIAKSAYPEAYVYFTSPVSLLDKLDFIEEVENII
ICDMAIEERHYSELHSTLEKFAEECNLYYIDHHPLPEKWKKEAWFYHDTSVCASELTYRV
FENLLNQEMRRVAIYGAIGDFCDNTPCVKSWVRDWDKRSLYFQAGTLIQAILQKGKEYDF
KRTLLEPLSNDVIPSNIPGLLELAREAAINEEKIRLFVKEHVEVLKNSAYIVNTNNSISK
AAIYAASYGHRDVGIAAEYRERKGVYDLSIRSRGKVDINRILRSIAPKFGGSGGGHPVAA
GARIPEDSLAGFLRAFDARLGEASEVK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactccagaaccaccttaaagcaaaaaccctgatcctgacccatggagactct
gatgggatatgttcgggagcaattgcaaaaagtgcctacccggaagcatatgtttacttt
acaagtccggtcagccttctcgataagttagatttcattgaggaagttgagaatattata
atctgcgatatggcaatcgaggaaaggcactactctgaactccactcaacacttgagaaa
ttcgcggaggaatgtaacctctattacatagaccaccatcctcttccggaaaagtggaaa
aaagaagcctggttttatcacgatacgagtgtatgtgcctccgagctgacctacagggtc
tttgaaaatctcctgaaccaggaaatgcggagggtagcaatctacggggctataggtgat
ttctgtgacaatacaccctgtgtaaagagctgggtcagagactgggacaaaagaagcctc
tatttccaggctggaaccctgatccaggcaatactccagaaaggaaaagaatacgatttt
aaaagaaccctgcttgaacccctatcaaatgatgttattccttcaaatatccctggtcta
ctcgagcttgccagggaagctgcaattaatgaagagaaaatccggctttttgtgaaagaa
catgtggaagtcctgaaaaacagcgcgtatattgtaaatacgaataactccatttcaaaa
gcagcgatctatgcagcttcctacggacatagagatgtgggaattgcagccgagtaccgt
gagagaaaaggcgtatacgatcttagcatacgttcccgtggaaaggtggatataaatcgt
atcctgcgctcgattgcacctaagtttggaggaagcggcggcgggcaccctgttgcagca
ggagcgcgtatccccgaagattcgctggcgggtttcctccgggcttttgatgccagactc
ggggaagcaagtgaggtaaaataa
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