KEGG   Methanosarcina sp. WH1: MSWH1_1450
Entry
MSWH1_1450        CDS       T03851                                 
Name
(GenBank) Phosphoesterase
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mef  Methanosarcina sp. WH1
Pathway
mef03410  Base excision repair
mef03430  Mismatch repair
mef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MSWH1_1450
   03430 Mismatch repair
    MSWH1_1450
   03440 Homologous recombination
    MSWH1_1450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mef03400]
    MSWH1_1450
DNA repair and recombination proteins [BR:mef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     MSWH1_1450
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     MSWH1_1450
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MSWH1_1450
SSDB
Motif
Pfam: DHHA1 DHH
Other DBs
NCBI-ProteinID: AKB21721
LinkDB
Position
complement(1757770..1758753)
AA seq 327 aa
MKELQNHLKAKTLILTHGDSDGICSGAIAKSAYPEAYVYFTSPVSLLDKLDFIEEVENII
ICDMAIEERHYSELHSTLEKFAEECNLYYIDHHPLPEKWKKEAWFYHDTSVCASELTYRV
FENLLNQEMRRVAIYGAIGDFCDNTPCVKSWVRDWDKRSLYFQAGTLIQAILQKGKEYDF
KRTLLEPLSNDVIPSNIPGLLELAREAAINEEKIRLFVKEHVEVLKNSAYIVNTNNSISK
AAIYAASYGHRDVGIAAEYRERKGVYDLSIRSRGKVDINRILRSIAPKFGGSGGGHPVAA
GARIPEDSLAGFLRAFDARLGEASEVK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaaagaactccagaaccaccttaaagcaaaaaccctgatcctgacccatggagactct
gatgggatatgttcgggagcaattgcaaaaagtgcctacccggaagcatatgtttacttt
acaagtccggtcagccttctcgataagttagatttcattgaggaagttgagaatattata
atctgcgatatggcaatcgaggaaaggcactactctgaactccactcaacacttgagaaa
ttcgcggaggaatgtaacctctattacatagaccaccatcctcttccggaaaagtggaaa
aaagaagcctggttttatcacgatacgagtgtatgtgcctccgagctgacctacagggtc
tttgaaaatctcctgaaccaggaaatgcggagggtagcaatctacggggctataggtgat
ttctgtgacaatacaccctgtgtaaagagctgggtcagagactgggacaaaagaagcctc
tatttccaggctggaaccctgatccaggcaatactccagaaaggaaaagaatacgatttt
aaaagaaccctgcttgaacccctatcaaatgatgttattccttcaaatatccctggtcta
ctcgagcttgccagggaagctgcaattaatgaagagaaaatccggctttttgtgaaagaa
catgtggaagtcctgaaaaacagcgcgtatattgtaaatacgaataactccatttcaaaa
gcagcgatctatgcagcttcctacggacatagagatgtgggaattgcagccgagtaccgt
gagagaaaaggcgtatacgatcttagcatacgttcccgtggaaaggtggatataaatcgt
atcctgcgctcgattgcacctaagtttggaggaagcggcggcgggcaccctgttgcagca
ggagcgcgtatccccgaagattcgctggcgggtttcctccgggcttttgatgccagactc
ggggaagcaagtgaggtaaaataa

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