KEGG   Methanosarcina sp. WH1: MSWH1_1806
Entry
MSWH1_1806        CDS       T03851                                 
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
mef  Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:mef00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mef02048]
    MSWH1_1806
Prokaryotic defense system [BR:mef02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    MSWH1_1806
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AKB22077
LinkDB
Position
2227280..2229205
AA seq 641 aa
MIIQSLCRCYDILEEDENANIPKLGYSSAKVSFALVISDDGVLSHIVDLRSEDKKPKPQN
MDVPAQKSRCSGVFPYFVCENSKYIFGVEKLKKNTFENKFNHPSSEGNPVDYTVLEENDK
EVTLVYQRSRECFEAFKALHHSILDGQDDPGVRGFLAFLDGWKPEEFLENPKINQYKDEL
LAGGNCIFEFDGEFLHRNSVVKNAWETNSHDETGDTVVAQCLVSGKVEPVAKVHQKIKGV
VGAQSAGASLVSFNDDAFCSYGKKQSFNSSVSESSMFKYTTALNHLLSSQSNRIRIADTT
VVFWAETSDKSGKKSCEDLVKFFFVPQETEKNEENPEIEKNEEKNVEVPRVQDTNQIQQI
EAILNKVRAGMKINQEDIKTDPEMNFYILGLSPNNARLAVRFWYVDSIGNFIEMMARHHL
DMEIIRGDYDPQYISIYRLLNETVPQSSDKKTVSPLLGGLIMRSILTNTVYPVSLYNAIL
SRVKVEGSINSVRAGFIKAYLLRLSRAGLLNVKQDLITMSLNEESSNVPYRLGRLFAALE
KAQNDTNKEMKSTINSKYFSSASSTPAVVFPVLLKLAQHHIAKSEWGFRSSQLIEQILAG
VDEFPAYLNLEDQGMFMLGYYHQRKAFFTKKEVISSKEESL
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgatcattcaatccctctgtcgttgttatgatattcttgaggaggatgagaacgctaac
attccaaagttggggtatagcagcgccaaggtctcgtttgcccttgttatttctgatgat
ggcgttctttcgcatattgttgatctcagaagcgaagacaagaaaccgaaaccacaaaat
atggatgttcctgcccagaagtctcgttgcagtggagtatttccatattttgtctgtgaa
aattcaaagtatatcttcggtgttgaaaaactgaaaaaaaatacttttgagaataaattt
aatcatccttcgtccgagggcaatcctgtcgattatacggtattggaggagaatgataaa
gaagtcactctggtttatcaacgttctagagagtgctttgaggccttcaaagctcttcac
cacagtatactagatggtcaagatgatccaggagtccgtggattccttgcttttctggat
ggatggaagccggaagaatttcttgaaaatccaaagatcaatcagtataaagatgaactt
cttgctggtggaaactgcatttttgaatttgacggggaatttttacatcgaaatagtgtg
gtgaaaaacgcatgggaaacaaactctcatgatgagaccggtgacacagtagttgctcag
tgcctggtgagtggaaaagtggagccggtagccaaggtacatcaaaagataaagggcgta
gtcggggctcagtctgcaggggcttcccttgtcagttttaatgatgatgcattctgttct
tatggaaaaaaacagagttttaattcctcagtcagtgaatcatcgatgttcaaatacacg
actgccctgaatcaccttctttcaagtcagagtaatagaattcggattgctgatacaaca
gttgttttctgggctgagacaagtgataaatcaggtaaaaaatcttgtgaagatcttgtg
aaattcttttttgtccctcaggaaacagagaagaatgaagaaaatccggagatagagaag
aatgaagaaaagaatgtagaggttcctcgagtacaggacacaaaccagattcagcagatc
gaggctattctcaataaggtccgagctggaatgaaaataaatcaagaagacattaagaca
gatccagaaatgaatttctatatccttggtttgtctcctaataatgcacgacttgctgtc
cgtttctggtatgttgacagtattgggaattttattgaaatgatggctcgccaccatctt
gatatggagatcatccggggtgattatgatccacagtacatctcaatatatcgcctgtta
aatgagaccgtccctcagagttctgacaaaaaaacagtatctccacttcttggcggcctg
attatgcgttcgatcctgaccaatacggtctaccctgtttctttatacaacgcaatcctg
agccgtgtaaaggtagagggctcaataaattcggtcagggcaggtttcatcaaggcatat
ttgctcagattaagcagagccggattattaaatgttaagcaggatttgattaccatgagt
ttaaacgaggagagttcaaatgtgccatatcggcttggaaggttatttgccgctcttgaa
aaggcacagaatgatacgaataaagagatgaagagcaccattaacagcaagtatttcagc
agtgcctcatcaacgcccgctgttgtgtttccggtgctgttaaaacttgcacaacaccac
atcgccaagtctgaatggggtttcagatccagtcagctgattgaacagattctggcggga
gtggatgagtttcctgcgtacctgaatctcgaagaccagggtatgttcatgcttggttat
tatcatcagcggaaggcatttttcacgaaaaaagaggttatttcaagtaaggaggagtcg
ttatga

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