Methanosarcina sp. WH1: MSWH1_1893
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Entry
MSWH1_1893 CDS
T03851
Name
(GenBank) Chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSWH1_1893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mef03019
]
MSWH1_1893
03110 Chaperones and folding catalysts [BR:
mef03110
]
MSWH1_1893
03029 Mitochondrial biogenesis [BR:
mef03029
]
MSWH1_1893
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mef04147
]
MSWH1_1893
Messenger RNA biogenesis [BR:
mef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSWH1_1893
Chaperones and folding catalysts [BR:
mef03110
]
Heat shock proteins
HSP70 / DNAK
MSWH1_1893
Mitochondrial biogenesis [BR:
mef03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
MSWH1_1893
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
MSWH1_1893
Exosome [BR:
mef04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSWH1_1893
Exosomal proteins of breast cancer cells
MSWH1_1893
Exosomal proteins of colorectal cancer cells
MSWH1_1893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
BcrAD_BadFG
FtsA
ParM_N
Phage_connect_1
SMBP
Motif
Other DBs
NCBI-ProteinID:
AKB22164
LinkDB
All DBs
Position
2326439..2328292
Genome browser
AA seq
617 aa
AA seq
DB search
MAKILGIDLGTTNSCVAVMEGGEAVVIPNAEGNRTTPSVVGFSKKGEKLVGQVAKRQAIS
NPENTVYSIKRHMGEPNYKVTLHGKAYTPQEISAMILQKLKNDAEAYLGETITQAVITVP
AYFNDSQRQATKDAGSIAGLEVLRIINEPTAASLAYGLDKGDVDQKILVYDLGGGTFDVS
VLELGGGVFEVKSTSGDTHLGGDDFDQRIIEYLLAEFRKIEGIDLSKDKAVLQRLKDAAE
KAKIELSGVASTNINLPFLTVGSDGEPKHMDVDLTRAQFQKMTEDLLEKTLVSMRRALSD
SKITPNDLDKVILVGGATRMPAVVELVENFTGKKPYKNINPDEAVAIGAAIQAGVLGGEV
KDVLLLDVNPLTLGIETLGGIATPLIQRNTTIPTKKSQIFSTAADNQPSVEIHVLQGERG
IASENKTLGRFTLDGIPPAPRGIPQIEVTFDIDANGILHVSAKDLGTGKKQSISIQKPGG
LSDAEIERMVKDAELHAEEDKKRKEEVETRNNAEALINASEKTLKEAEDVATEDQKSKIT
AAIEDLKKALEGKDIEDVKAKSEALQEAVYPVSTAMYQKAQEAAQQAAGEEGSTDAKDPD
ETVVDADYEVVDDEKSK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatactgggaatagaccttggtactactaactcatgtgtggcagtgatggaa
ggcggggaagctgtcgtgatcccaaatgccgaaggcaacagaacaactccttcagttgtt
ggattttccaagaaaggggagaaacttgtgggtcaggtcgcaaaacggcaggctatatca
aacccggaaaacaccgtttattccattaaaagacacatgggagaaccaaactacaaagtt
acacttcacggaaaagcatataccccgcaggaaatttctgcgatgattctccagaagctc
aaaaacgatgcagaggcttatctcggagagacaataacacaggctgttattacagttcct
gcttatttcaacgattcacagaggcaggctacaaaagatgcaggttcaattgcagggctt
gaagtcctgagaattataaacgagcccacagctgcgtccctggcttacgggcttgacaaa
ggagatgtagaccagaagatccttgtctacgaccttggaggcggaacctttgatgtatcc
gttctggaactcggaggtggagtctttgaggtaaaatccacaagtggagacactcacctt
ggaggcgacgacttcgaccagcgcattatcgagtacctgctcgcagaatttaggaaaatc
gaaggaatcgacctttccaaagacaaggctgtactccagcgccttaaagatgctgctgaa
aaagccaagatcgaactttcaggtgttgccagcaccaacattaaccttcccttcctcaca
gtcggttctgatggggaaccaaaacacatggatgttgacctgaccagagcccagttccag
aaaatgactgaggaccttctggaaaagacccttgtatccatgcgccgcgcactcagtgac
tcaaaaattaccccaaatgaccttgataaagtgatccttgttggaggcgcaacaaggatg
cctgccgtggttgaacttgtggagaatttcacaggcaagaaaccctacaagaacatcaac
cctgatgaagcagttgcaatcggtgcagccattcaggcaggagtcctgggtggagaagta
aaagatgtccttctactcgacgtcaatccccttactctgggtatcgagaccctcggaggc
attgcaactccactcatccagaggaacaccaccattcctactaaaaagagtcagatcttc
tcaactgctgctgacaatcagccctcagtcgaaattcatgttctgcagggagaacgaggg
atagcttctgaaaacaagacccttggcagattcacccttgatggtataccccctgctccg
agaggtatcccgcagatcgaggttacctttgatattgatgcaaacgggatcctgcacgtg
agtgcaaaggacctgggcacaggcaagaaacagtccatttccatccagaaacccggcgga
ctttctgatgcagaaatcgagcgcatggtcaaggatgctgaactgcatgccgaagaggac
aagaagcgcaaggaagaagtcgagaccagaaataacgcagaagccctaatcaatgcctca
gaaaagactctcaaggaagccgaagatgtagcaaccgaagaccagaagtcaaagatcact
gctgcaatcgaagacctgaagaaagccctggaaggcaaggacattgaagatgtcaaggca
aagtcagaggctcttcaggaagccgtatatccggtatcgacagccatgtatcagaaagct
caggaggcagcacagcaggctgcaggcgaagaaggaagtacggatgccaaagaccctgat
gaaacagtcgttgatgcagattacgaggtagttgacgacgaaaagagtaagtaa
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