Methanosarcina sp. WH1: MSWH1_2076
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Entry
MSWH1_2076 CDS
T03851
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mef03016
]
MSWH1_2076
Enzymes [BR:
mef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSWH1_2076
Transfer RNA biogenesis [BR:
mef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSWH1_2076
Prokaryotic type
MSWH1_2076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKB22347
UniProt:
A0A0E3NRB3
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Position
2543307..2544623
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AA seq
438 aa
AA seq
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MEVPEIEKQIGMNLYFTDTEGLGGQLRQEIEDFIVKEVTNREEGKEGKYLILELTKRDWD
THHFTRTLAKILQVSQKRISVAGTKDKRALTTQKISIFDTDASEIQKIHLKDIELKVLGR
SRKSVELGDLWGNDFIITVRGIESSPEKTGSLLKKTTEEILAQGGVPNFFGVQRFGSVRP
VTHLVGKDIVEGNFEKAALRYIAEPFPDEPEETKAARQFVKDTRDYREGLKTYPLRLGHE
RAMMNHLIANPEDYSGAFRVLPQNLYRMFVHGYQSYIYNIVLCRRIERGIPLNQAVDGDL
VCFRNEADLPDSSKTEKVTSETVNAMNRLIKHGRAFITAPLPGFKTEFASGIPGEIESEV
LKELGVSLEGFNIEEFPKMSSKGTRREVLLHVEPKYEVSEDELNPGKSKAVLKFMLPKGS
YATTVLREYMKVDPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagttccggaaattgaaaaacagataggaatgaatctttactttactgataccgaa
gggcttggagggcagctccgtcaggaaatagaggatttcattgtaaaagaggtcacaaac
agggaggaaggaaaggaaggaaaatacctcatcctcgaacttacaaaacgagactgggat
acgcaccatttcaccaggaccctcgcaaaaatcctccaggtaagccagaaaagaatcagc
gttgcaggtacaaaagataaacgggcactcactacccagaagatcagcatatttgatacc
gatgcatctgaaatccaaaaaatccacttaaaagacatagagctgaaagtgctgggccgc
tcccggaagtctgtggaacttggagacctgtggggaaatgatttcattatcacagtccgg
ggcattgagagttctccagaaaaaacaggctctctgctcaaaaagacaactgaagaaatc
cttgctcagggcggcgttcccaacttctttggggtccagcgtttcggctctgtccgccct
gtgactcatctggtaggaaaagacattgttgaaggaaactttgaaaaggcagccctccgc
tatattgctgaacctttcccggatgaaccggaagagacaaaagcagcccgccagtttgta
aaagacacccgcgattatagagaggggctgaaaacctatcccctccgcctgggccacgaa
cgggcaatgatgaaccacctgatagcaaacccggaagattattccggagcgttccgcgtg
ctcccccagaacctctacaggatgttcgtacacggctatcagtcctatatttataacata
gttctctgccgtcggattgaacgcggcatccccttaaaccaggcagtggacggagatctc
gtctgcttcaggaacgaagccgacctccctgattcctcaaagactgaaaaagtcacctcc
gaaaccgtaaacgccatgaaccgcttgattaagcatggcagagctttcataaccgccccc
cttccgggctttaagactgaattcgcatccggtataccgggagaaatcgaaagcgaggtc
ctcaaagaacttggagtttctctcgaaggtttcaatatagaagagttcccgaaaatgagt
tcgaaaggcacccgaagggaagtcctcctgcatgtggaaccgaagtacgaggtctcggaa
gatgagctgaatcccggaaagtcaaaagcggttctgaaattcatgctccccaagggaagt
tatgctacaaccgtgctgcgggaatatatgaaagtggacccgctgcagatgagctga
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