Methanosarcina sp. WH1: MSWH1_2180
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Entry
MSWH1_2180 CDS
T03851
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWH1_2180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_2180
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWH1_2180
Transcription machinery [BR:
mef03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWH1_2180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CBP66
DUF1947
Motif
Other DBs
NCBI-ProteinID:
AKB22451
UniProt:
A0A0E3L509
LinkDB
All DBs
Position
complement(2670601..2671797)
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AA seq
398 aa
AA seq
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MSISEATIDSMIKDLPFPSNILNTLREDVLKAGVSKKEMEEIIEKMMEEYDASCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKD
NPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDQVKE
KFNEELNVLVSISPDIDNQIVITPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEGE
EYTLYTEGSALRDVLQFEGVDKTRTSTNNINEIYEVLGVEAARNAIIKEATDTLREQGLT
VDIRHIMLVSDLMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDKLE
GVTENIIVGQPIRMGTGDVHLVSRRAEKVVAEEIEAEE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagtattagtgaagctaccatagacagcatgataaaggacctgccgtttccttctaac
atattaaacaccctgagagaagatgttctcaaagccggggtaagcaagaaagaaatggaa
gaaatcatcgaaaagatgatggaagaatatgatgcctcatgcattgaaccctgtgatgct
gcgggcgttgtcgcagcccagtcaataggagaaccgggcacacagatgacgatgcgtacc
ttccactatgccggtgtggccgagattaacgttactctcggtcttccccgccttattgaa
atcgtggatgcccggaagattccgagcactcctatgatgacaatagccctttccaaagat
aatcctgaggattatgcttatgacagggaaaagacaagagccctggcctgggagattgag
gcaaccaaaatcgatcacatcgccgacgtgaccaccgacctctcccagatgaaacttata
atagacctgcacgaaaaggcaatggaaggcaggaatattacaatagaccaggtgaaggag
aagttcaacgaagagctgaatgtactggtcagcatctctcctgatatagataaccagata
gtcatcactccgggagagccttcttacagagagctgctccagcttgcaaaaagcatccac
aatgtaaccctcaagggcatagaagggatcaagagagtggtggtcagaaaggagggggaa
gagtacaccctttatacagaaggttcggctctgcgcgatgtgcttcagtttgaaggggtg
gacaagacaagaaccagcacaaacaacattaatgaaatctacgaagtgctgggagttgag
gctgcaagaaacgcaataatcaaggaagccacagataccctgcgcgaacagggccttacc
gtcgatatccggcacattatgcttgtgtcagacctcatgacctgtgacggagaagtaaaa
cagatcggcaggcatggaatttcgggtgaaaaggcaagtgtatttgcccgtgcagctttc
gaagttactgtcaatcatctcctggatgcaggcatgcgtggagatgtggacaagctggag
ggtgtcacagaaaatatcattgttggtcagccaattcgtatgggcaccggagatgtgcac
cttgtaagcagaagagcagaaaaagttgtagctgaggaaattgaggcagaagaatga
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