Methanosarcina sp. WH1: MSWH1_2181
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Entry
MSWH1_2181 CDS
T03851
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWH1_2181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_2181
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWH1_2181
Transcription machinery [BR:
mef03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWH1_2181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKB22452
UniProt:
A0A0E3NSA8
LinkDB
All DBs
Position
complement(2671797..2674439)
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AA seq
880 aa
AA seq
DB search
MANVPPIPKRIASIKFGLMSPKEIRKMSATPIITADTYDDDGFPIDMGLMDTKLGVIDPG
LRCKTCSGRAGECPGHFGHIELVAPVVHVGFNKVIRKLLRATCRKCSRILLEPAQKQQFL
DQLVAVEEIGHMPDDLINEAYKEASKIKSCPYCNEEQLEIKFEKPSEYLENGEKLTPTEI
RDRFENIPDEDIKVIGMDPKNARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLV
DIIRINQRFQENREAGAPQLIIEDLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQ
RLKGKEGRFRGSLSGKRVNFSARTVISPDPNLSINEVGVPMPIARILTMPAVVTKRNIEQ
LKVFVRNGEDIHPGANYVLRSDGRRIKVTNMNKDDLAEKLEFGWTVERQLKDGDTVLFNR
QPSLHKMSIMAHSVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHALQTEESRAEAKILMQ
VQENILSPRFGGPIIGGIHDHISGLFLLTRFENHITSYEAYDLLRKSRARNLPEPAGHDE
DGKPYWTGKQIFSQILPEDLNTEFTAQVCAHCDTCKKEECPNDAYVVIRNGELLMGTIDE
AAIGAFKGKIQDRIIKEIGPEAGSRFIDDMTKLAIRAIMRTGLSFGIADEDIPKEARIQI
NEVLSKAEDAVQNLIKSYINKELEPLPGRTLDETIEMSIMQKLGKARDETGGIADSHMGL
ENSAVIMARSGARGSILNLTQMAACVGQQAVRGERIRRGYAGRTLTHFQEGDLGSDAHGF
VKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDT
RGVLVQFKYGEDGINPTKSDFSKPETIHRIVRSVVNKEVA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtacctccgattccgaaaagaattgcttctatcaaattcggtttaatgtcc
ccaaaagaaatccgtaagatgagtgcaacgcctattatcacggctgacacttatgatgac
gacgggtttccaattgacatggggcttatggacacaaaactcggggtaattgaccccggg
cttcgctgcaagacatgctccggcagggcgggcgaatgtcctggacacttcgggcacatt
gaacttgttgcccctgttgtccatgttggttttaacaaagtaatcagaaaactcctcagg
gcaacctgcagaaaatgcagcaggattctgctggaaccggcccagaaacaacagtttctg
gatcaactcgttgcagttgaagaaatcgggcacatgcctgatgatctcattaatgaggca
tataaagaagccagcaagataaagagctgcccatactgtaatgaggaacagctcgaaata
aaattcgaaaagcccagcgaatacctggaaaacggggagaagctgacccctaccgagatc
agggaccgctttgagaacatccctgacgaggacatcaaagttatcgggatggacccgaag
aatgcaagaccagagtggatgatcctcacagttttgcctgtgccccctgttacggtgcgc
ccttcgatcacccttgaatccgggcagcgcagtgaagacgacctgacccacaagctggtg
gacatcatcaggatcaaccagagattccaggaaaacagggaggcgggagccccacagctt
atcattgaggacctgtgggagcttcttcagtatcacgttactacattctttgataactcg
gtttcaggaataccccctgcaagacatagatcaggcagacctcttaagacgctttcccag
cgtttgaaaggtaaagaaggaaggttcagaggaagtttgtcaggtaagcgtgttaacttt
tctgcccgtaccgttatctcccctgacccgaacctgagcataaatgaagttggcgtcccc
atgcccattgcacggattctgacaatgccagcagtggtgaccaaaaggaacatcgaacag
cttaaggtctttgtaaggaacggcgaagacattcaccccggagcaaattatgtactcagg
tccgacggcaggcgcataaaggtaaccaatatgaacaaggacgaccttgccgagaagctg
gaattcggctggactgtggaacgacagttaaaagacggcgacaccgtgctcttcaacagg
cagccttctttgcacaagatgagtattatggcccattccgtaaaggttctgcctaacaaa
acattcaggctgaaccctgcggtctgccccccttacaacgctgactttgacggagacgaa
atgaacatgcatgccctccagaccgaagagtcaagggccgaggcaaagatcctcatgcag
gttcaggaaaacatcctctccccgcgtttcggaggccccattatcggtggtattcacgac
cacatttcagggcttttcctgctgacccgttttgaaaaccatattaccagttacgaggct
tatgaccttctgaggaagagccgcgcacgcaacctgcctgaacctgccggccacgacgaa
gatgggaaaccttactggacaggaaaacagattttcagccagatcctgcctgaagacctt
aatacagagttcacagcccaggtctgtgcacactgcgatacctgtaaaaaagaagaatgt
cctaacgatgcctatgtagtaatccggaatggtgaactccttatgggcactatagacgaa
gcggccattggggcattcaaaggaaaaattcaggaccgcattatcaaggaaatcggtccc
gaagccgggtctaggtttatagatgatatgaccaagcttgcaatccgggcgatcatgcgg
acaggcctgagtttcggaatagctgacgaagatattcctaaagaagccagaatccagatc
aatgaggttctcagtaaagctgaagacgctgtgcagaaccttatcaaatcttacataaat
aaagagcttgaacccctccccggaagaacccttgatgaaacaattgaaatgagcatcatg
cagaagctcggaaaggccagagacgagaccggtggaattgcagacagccacatggggctt
gaaaattcagcagttatcatggcgcgttcaggagctcgaggttccattctgaaccttacc
cagatggcagcctgtgttggccagcaggcagtgcgtggagagcgcattcgcagaggctac
gcaggcaggactctgacccacttccaggaaggtgacctgggatcggatgctcacgggttc
gtcaaggcaagttacaagagcgggttaaacccgacagagtatttcttccacgcaatcggt
ggtagagaaggtcttgtggacactgcggtcaggacatcacagtccgggtacctgcagaga
agacttgtcaacgcccttcaggaccttgaagtccagtacgaccttacagtcagggacacc
agaggtgtgcttgtgcagttcaagtacggggaagatgggattaacccaacaaaaagcgac
ttcagcaagcctgagaccatccacaggattgtccgttctgtggtaaacaaggaggtggca
tga
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