Methanosarcina sp. WH1: MSWH1_2399
Help
Entry
MSWH1_2399 CDS
T03851
Name
(GenBank) SSU ribosomal protein S27Ae
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSWH1_2399
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MSWH1_2399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mef03011
]
MSWH1_2399
04121 Ubiquitin system [BR:
mef04121
]
MSWH1_2399
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mef04147
]
MSWH1_2399
Ribosome [BR:
mef03011
]
Ribosomal proteins
Eukaryotes
Small subunit
MSWH1_2399
Archaea
MSWH1_2399
Ubiquitin system [BR:
mef04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
MSWH1_2399
Exosome [BR:
mef04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSWH1_2399
Exosomal proteins of colorectal cancer cells
MSWH1_2399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S27
Zn_ribbon_Nudix
Ribosomal_L37e
Rcat_RNF216
IBR_1
Zn_ribbon_RPB9
IBR
Zn_Ribbon_TF
Zn_ribbon_3
Cas12f1-like_TNB
DUF6671
Zn_ribbon_11
DUF1451
MqsA_antitoxin
Zn_ribbon_IS1595
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
AKB22670
LinkDB
All DBs
Position
complement(2943029..2943178)
Genome browser
AA seq
49 aa
AA seq
DB search
MAVKDYYKVQGDSVTRLKQFCPRCGPGIFLADHKNRLACGKCGYTEFKK
NT seq
150 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaagattactacaaagtccagggcgactccgtaaccagactcaaacagttt
tgtccaagatgcggaccaggtatattccttgccgaccacaaaaaccgtctcgcctgcggg
aagtgcggctataccgagttcaagaagtaa
DBGET
integrated database retrieval system