Methanosarcina sp. WH1: MSWH1_2403
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Entry
MSWH1_2403 CDS
T03851
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWH1_2403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_2403
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWH1_2403
Transcription machinery [BR:
mef03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWH1_2403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
DUF826
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AKB22674
UniProt:
A0A0E3NRW6
LinkDB
All DBs
Position
complement(2944292..2944864)
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AA seq
190 aa
AA seq
DB search
MKLVDTVRIPPTLLGEEVMPTIKNALREKLEGQVDKKLGSLVAVYNIDEVGEGHILVGDG
AVYYDVTFEAIMFLPELQEIIEGEVVEAVGFGVFIGMGPMDGLLHVSQITDDFISYDAKN
ARLVTKTGGKSIAEGDHVRARIVAVSINEREPKESKIGLTMRQTALGKLQWLEEARRKKQ
PQEITGEETT
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgttgatactgttcgcatccctcctacccttctcggggaagaagtgatgcct
accattaaaaacgcgttacgggaaaaacttgaggggcaggttgacaaaaaacttggctcc
ctcgttgcggtttacaatatcgacgaggttggagaagggcatatccttgtcggagacggg
gccgtatactatgatgtgacattcgaagcaataatgtttcttccagagctccaggagatt
atcgaaggtgaggtcgtggaagctgttggctttggagtattcataggaatgggtccaatg
gacgggctgctccacgtaagccagattactgacgacttcatttcctatgatgccaaaaac
gcaaggcttgtcactaaaaccggaggcaagtcaattgctgaaggggaccatgtaagagcc
agaattgttgcagtcagcatcaatgaaagggaaccaaaagaaagcaagatcgggcttacc
atgcgccagactgcccttggaaaattgcagtggctcgaagaagcccgcaggaagaagcag
cctcaggaaatcacaggtgaagagactacctga
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