Methanosarcina sp. WH1: MSWH1_2419
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Entry
MSWH1_2419 CDS
T03851
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSWH1_2419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mef03019
]
MSWH1_2419
03012 Translation factors [BR:
mef03012
]
MSWH1_2419
Messenger RNA biogenesis [BR:
mef03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSWH1_2419
Translation factors [BR:
mef03012
]
Eukaryotic type
Release factors
MSWH1_2419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
SLX1_C
HMBD
Vps36-NZF-N
HypA
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AKB22690
UniProt:
A0A0E3NRX6
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Position
2961906..2963153
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AA seq
415 aa
AA seq
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MGEYCTYEKYVFKKKLETLRNKSGRGTELISLYIPPDKQISDVTDHLREEHKQASNIQPE
LASKNLQGALDSLLAKLKFLNKVPENGIVYLTGTVDTGANRTGMVNEVLIPPDPVVRYIY
HCDSVFYLEPLEEMLRECSTYGLILLDLREATIGMLVGKQIEVIRHLHSTVPGKQRKGGQ
SAHRFEQLRRIAIHDFYKRIGDAASAAFLELEPAELKGILIGGHSPTKEEFSEGEFLHYE
LQKKVLGLFDTGYTDESGFSELINAAEDTLQGIDLFKQKKDMEIFFKEIATESGKVSYGE
DNVRANLEIKAVDVLLLSEDLRSERVTIKCSICGYENKRTRKRKPNEAVPVAGNCPECGS
ALEATDVIDIVSELSELADKGDARITFISTDFDEGSQFMIAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatactgtacatatgaaaaatatgtatttaaaaagaagcttgaaactctaaga
aataaaagtggaaggggcacagaattaatttccctttatattcctcctgataaacagatt
tcagatgttacagatcatttgagagaagaacataaacaggcttcgaacattcagcctgaa
cttgccagcaagaacttacagggagcacttgattctttgctggcaaagttaaaatttctt
aacaaagtaccggaaaatgggatagtttatttaacaggaactgtcgataccggagctaac
aggacaggcatggtgaacgaagttcttattcctccggaccctgttgtgcgttatatatat
cactgtgattccgttttttatcttgagcctcttgaggaaatgcttagagagtgcagtact
tatgggcttatacttcttgatttaagagaagctactatcggaatgcttgtaggtaaacaa
attgaagttatcaggcatctccactctacggtccccggcaaacaaagaaaaggaggccag
agcgcgcatcgttttgaacaactcagacgcattgctattcatgatttctacaaaagaata
ggggatgctgcaagtgcggcattccttgaattagagccagctgaacttaaaggcattctt
ataggagggcattctccgactaaagaagagttcagtgaaggtgaatttctacattatgag
cttcagaaaaaggttctcggattgtttgatacggggtatacggatgaatcgggtttttct
gagttaataaatgcagcagaggatacactccagggtattgacttatttaaacaaaagaaa
gatatggaaatattttttaaagagatcgctactgagtctggtaaagtatcctatggagaa
gacaatgtgcgggcaaatcttgaaataaaggcagttgatgtgcttttactttcagaagac
ctgagatctgaaagagtgactatcaaatgcagcatttgcggatatgagaataaacggaca
aggaaacggaaacccaatgaagctgttcctgtggcaggaaattgtccagaatgtggttct
gcacttgaagccacggatgttattgatatcgttagtgaattatcagaactcgccgataaa
ggcgatgcaaggattacttttatatcaacagatttcgacgaaggctctcaatttatgata
gcttttggtggaattgctgcaatcctcagatatagtacaggggtgtaa
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