Methanosarcina sp. WH1: MSWH1_2738
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Entry
MSWH1_2738 CDS
T03851
Name
(GenBank) Geranylfarnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef00900
Terpenoid backbone biosynthesis
mef01100
Metabolic pathways
mef01110
Biosynthesis of secondary metabolites
Module
mef_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSWH1_2738
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
MSWH1_2738
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mef01006
]
MSWH1_2738
Enzymes [BR:
mef01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSWH1_2738
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSWH1_2738
2.5.1.29 geranylgeranyl diphosphate synthase
MSWH1_2738
Prenyltransferases [BR:
mef01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSWH1_2738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
FA_synthesis
Motif
Other DBs
NCBI-ProteinID:
AKB23009
UniProt:
A0A0E3NV87
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All DBs
Position
3350710..3351675
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AA seq
321 aa
AA seq
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MMLIDEIKKRSSHVDAAIDELLPITRPEELYKASRYLVDAGGKRLRPAVLILAAEAVGSD
LKSVLPAAVAVELVHNFTLIHDDIMDKDNIRRGMPAVHVKWGEAGAILAGDTLYSKAFEI
LSKVDNEPVRILKCMDVLSKTCTEICEGQWLDMDFETRDRVTELEYIEMVEKKTSVLYAA
TAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMVAPEEVLGKVRGSDLMEGKYT
LIVIDAFSKGVKLDIFGKGAATLEETEAAVRTLTECGSIDYVKNLAISYINQGKAKLDVL
RDCPEKELLLQIADYMIARNY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttattgatgagatcaaaaagagaagttcccatgttgatgctgcaattgacgaa
ctacttccaataacccgtcccgaggagctgtacaaagcttctcgctatctcgtggacgcc
ggcggaaagcgtcttcgtccggcagtccttatcctggcagcagaagctgtcggctccgat
ctcaagtccgttttgcccgcagcagtggctgtggaacttgtacataatttcactctgatc
catgacgacattatggataaggacaatatccgcaggggaatgcctgcagtccatgttaaa
tggggtgaagccggggccatccttgccggagacaccctttactccaaagcgttcgagatc
ctgtcaaaggttgataacgaacctgtaaggattttaaagtgcatggatgtcctctcaaag
acctgtaccgaaatctgtgaagggcagtggcttgacatggacttcgaaacaagggacagg
gtaacggaacttgagtacatcgaaatggtggaaaagaagacctctgtcctctatgcagcc
acagccaaaatcggtgctctcctcggtggagcctccgacgaggttgccgaggccttatcc
gaatatggtcgcctcatagggatcggtttccagatgtacgatgacgtcctggacatggtc
gctcctgaagaagtgctcggaaaggttagaggcagcgacctcatggaaggaaagtacacc
ctcattgtcattgacgccttcagcaaaggcgtaaaactggacatcttcgggaaaggggca
gccactcttgaagaaaccgaagcagctgtccggactctgaccgaatgcggatccatcgat
tacgtgaaaaatcttgcaatctcatatatcaatcaaggaaaggcaaaactggatgtcctc
agagactgtcctgaaaaagaacttctcctccagattgctgactatatgattgcaaggaac
tactga
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