Methanosarcina sp. WH1: MSWH1_2905
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Entry
MSWH1_2905 CDS
T03851
Name
(GenBank) Putative transcription antitermination protein NusG
KO
K15172
transcription elongation factor SPT5
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MSWH1_2905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_2905
03019 Messenger RNA biogenesis [BR:
mef03019
]
MSWH1_2905
Transcription machinery [BR:
mef03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MSWH1_2905
RNA polymerase I system
MSWH1_2905
Messenger RNA biogenesis [BR:
mef03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MSWH1_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW5_SPT5
Motile_Sperm
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AKB23176
UniProt:
A0A0E3L5F4
LinkDB
All DBs
Position
3552461..3552919
Genome browser
AA seq
152 aa
AA seq
DB search
MSEDSQIFVIKTTANQERSVATTLARISKKEKLDIRAILAPDELKGYVLVEAPKSGIVEL
AIQTIPHARALVKGSSSIAEIEHFLKPKPIVTGIKEGAIIEVTSGPFKGEKARVKRVDEG
HEEITVELFDAVVPIPITIRGDTVRILKKEKE
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggattcccagatattcgtaatcaaaaccacagcaaaccaggaaagatcagtt
gcaacgacccttgcaagaatttcgaagaaggagaaactggacataagggcaatcctagct
cctgatgagctcaaaggatatgtccttgtcgaggcacccaaatccggaatcgtggaactg
gcaatccagacaatcccacacgcaagagcccttgtcaaagggagttcttcaatcgcagaa
atagagcacttccttaagcccaagccaatagtgaccggaatcaaggaaggggctataatt
gaggtcacctctggacccttcaagggagagaaagcccgggttaaaagggttgacgaaggg
catgaggaaattactgtggaactctttgacgctgtggttccaatccccatcactattcgc
ggcgacacggtaagaatactcaaaaaagagaaagaataa
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