Methanosarcina sp. WH1: MSWH1_3110
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Entry
MSWH1_3110 CDS
T03851
Name
(GenBank) Transcription factor S
KO
K03057
transcription factor S
Organism
mef
Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_3110
Transcription machinery [BR:
mef03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
MSWH1_3110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Cas12f1-like_TNB
Zn_Ribbon_TF
Zn_ribbon_CLPX_N
FdhE_central
Zn_ribbon_3
CPxCG_zf
DUF8512
Ogr_Delta
C1_2
DUF5817
DZR
FYVE
Ribosomal_S27e
GpA_ATPase
Zn_ribbon_IS1595
Zn_ribbon_6
zf-UBP
Zn_ribbon_15
NANM
DUF2752
GFA
Zn_ribbon_Nudix
zf_MP81
C1_1
Baculo_LEF5_C
DUF7837
PGRL1_C
DUF5830
Zn_ribbon_Brz
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AKB23381
LinkDB
All DBs
Position
3794621..3794935
Genome browser
AA seq
104 aa
AA seq
DB search
MQFCTKCKSMMFPKDGNYHCRKCGNIIPIENNAKNFVSKAKIDDHEVVVLEGEQTSGLPT
TSVKCPECGNNTAAWWLRQLRSADESETRFLKCTKCGFTWREYD
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctgtaccaaatgcaaaagtatgatgtttcctaaagatggtaactaccattgc
agaaagtgtgggaacataataccgattgaaaataacgcaaagaatttcgtctccaaagcc
aaaattgacgatcatgaagtagtggtactcgaaggtgaacagacttcaggcctgccaaca
acgagtgtaaagtgcccggagtgcgggaacaatactgcggcctggtggctcagacaactc
aggtctgcagacgaatccgaaacccgtttcctgaagtgtacgaaatgcgggtttacctgg
agagaatacgactaa
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