KEGG   Methanosarcina sp. WH1: MSWH1_3111
Entry
MSWH1_3111        CDS       T03851                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mef  Methanosarcina sp. WH1
Pathway
mef03030  DNA replication
mef03410  Base excision repair
mef03420  Nucleotide excision repair
mef03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSWH1_3111
   03410 Base excision repair
    MSWH1_3111
   03420 Nucleotide excision repair
    MSWH1_3111
   03430 Mismatch repair
    MSWH1_3111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mef03032]
    MSWH1_3111
   03400 DNA repair and recombination proteins [BR:mef03400]
    MSWH1_3111
DNA replication proteins [BR:mef03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSWH1_3111
DNA repair and recombination proteins [BR:mef03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSWH1_3111
   MMR (mismatch excision repair)
    Other MMR factors
     MSWH1_3111
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSWH1_3111
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AKB23382
UniProt: A0A0E3NT52
LinkDB
Position
3795241..3795978
AA seq 245 aa
MFKAAINAELLKDAIAALAVIVDEVRFKIKPEGISVKAVDPANVAMGIFELGSSAFDEYS
ADECEIGIDLNKITDLLGIAERSDTVRMELEEGSNKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSGDTFYIEAKGDTDKVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGRDFPVLIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgccgcactggctgta
attgtagatgaggttcgattcaagattaaacccgaaggtatttcggtaaaagcagttgac
cctgctaacgttgcaatgggaatttttgagcttggatcatcggcttttgatgaatacagc
gctgatgagtgtgagatcgggattgacctgaataagattaccgaccttctgggaattgcg
gaaaggagcgatacagtccgaatggaacttgaagaaggaagcaataaactcctgattgat
gtaggagggctgtcctatactctttctcttctggatccttcgacaatccgtgcagaaccc
agagttccccaactcgagctgcctgccaaagttgtcctgaatggtgcagacctcaggcgt
gccgtaaaagccgcggaaaaaataagcgaccatatgctcatgggagtttctggcgatact
ttctatatagaagctaagggcgataccgataaagtccgcctggagatgggcagagaccag
ttaattgaccttaaagcaggtgaagcctgttccctcttctcccttgactacctgacagat
atagtcaagcccacaaacaaggtaaatgaggttactctctctcttggcagagatttccct
gtcctgattgactttgaaattgcaaacggtgcaggaagaatatcttacctcctggctccg
agaatagaatcagactaa

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