Methanosarcina sp. WH1: MSWH1_3164
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Entry
MSWH1_3164 CDS
T03851
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSWH1_3164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mef03019
]
MSWH1_3164
03012 Translation factors [BR:
mef03012
]
MSWH1_3164
Messenger RNA biogenesis [BR:
mef03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSWH1_3164
Translation factors [BR:
mef03012
]
Eukaryotic type
Release factors
MSWH1_3164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Spectrin_3
HypA
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKB23435
UniProt:
A0A0E3NTY1
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Position
complement(3863198..3864445)
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AA seq
415 aa
AA seq
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MTEQSAHEKYEFKKKLEGLRNKRGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGVVYFTGAVDIGANKTNMESEVIVPPDPITVYKY
HCDSSFYLEPLEDMLKDKNTYGLLVLDRREATVGLLVGKRIQAFRNLTSTVPGKQRKGGQ
SAHRFQQLRLIAIHEFYKRIGDAASEIFMGVDHKDLKGVLIGGPSPTKEEFYAGDFLHHE
LLKKIIGLFDTAYTDESGLSELVNAAGEKLQDLELTGQKNAVRSFFKELISDSGKVAYGE
AQVRANLEINSVDVLLLSEDLRAERVTTKCSVCEYENKWTRRWKPGEPAPTAGNCPKCGS
SLEVTDVTDVVDEFSELADKSNAKVFFVSTDFDEGSQLMNAFGGIAAILRYNTGI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatccgcacacgaaaagtatgaatttaaaaagaagcttgaaggtctcagg
aataagagaggaaggagcacggagcttatttctctttatattcctgctgacaagcagatt
ttcgatgttacaaaccagttaaaagacgagcacggacaggctgcaaacatcaagtccaag
cttacgaggacgaatgtgcagggagcaattgagtctctgctttcaaggctaagatacctg
gacaaagtacctgagaatggggtagtgtactttacaggagctgtggatatcggagccaac
aagacaaatatggaaagcgaggtaattgttcctcctgaccccataactgtctacaaatac
cactgtgactcatctttctaccttgagcctcttgaggatatgctcaaagataagaacacc
tacgggcttctggttcttgaccgcagggaagcaactgtagggcttctggtcggaaaacga
atccaggctttccgcaacttgacctcaacggttcccggaaagcaaaggaaaggtggtcag
agtgctcatcgtttccagcagctcaggctcattgcaattcatgagttctacaagaggata
ggagatgctgcaagtgagattttcatgggtgtagaccataaagatctcaaaggcgtcctg
atagggggtccttcaccgacaaaggaagagttctatgcaggtgatttcctgcaccacgag
ctcctgaaaaaaattattgggctctttgatacggcatataccgacgagtccgggctttca
gaacttgttaatgctgcaggggaaaagctccaggaccttgagctcacgggacagaagaat
gccgtcagatcctttttcaaagaactgatttccgattcgggtaaggtagcttatggagaa
gcccaggtcagggcaaacctcgagatcaattcagtggatgtgctcctgctttccgaagac
ctgcgtgcagaaagggtaactacgaaatgtagtgtctgtgaatacgaaaataagtggaca
cggcgctggaagcctggagaacctgctcccacagccggaaattgccctaaatgtggttct
tctcttgaggttacggacgttacagatgtcgtggatgaattctcagagcttgccgacaag
agtaatgcaaaggtattcttcgtatccaccgactttgatgaaggttcccagcttatgaat
gcttttggaggcatagctgcaatcctcaggtacaacactgggatttga
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