Methanosarcina sp. WH1: MSWH1_3166
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Entry
MSWH1_3166 CDS
T03851
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSWH1_3166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mef03032
]
MSWH1_3166
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSWH1_3166
DNA replication proteins [BR:
mef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSWH1_3166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKB23437
UniProt:
A0A0E3NTE4
LinkDB
All DBs
Position
complement(3866346..3868376)
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AA seq
676 aa
AA seq
DB search
MNEIDIVRAVIEEGYQISPQAVELIKLSNSPESLLKYILSTIDDCVFVIEPEHIDLKDFE
ASKMVSRIISETSPGAVSQMASGKISSSPLEPVDSHVVKTFDPALDALEEPGLSSIESDV
FSAVEVSDSNPEIKPDILSSQGSDPVHDSVHDSVHDSVHDSVHDSVHDPVHDSVHDSVHD
SVHDSVHDSVHDSAHDSAHGSFSNPVYPSASSRSVEKSASSFFGHAGSPSPSNRAYGADS
LFSNQGNSFRSSSRDEEVRYLPGRNPVTVLSDITGHSTCVGEYMQFVQYFRDRYSRLSEI
IRGRINARPIESLKRRNFRRGSDGNTEEISIIGMVSDISSTTNGHKIFSLEDSTGSFSVL
IRNSDKELFELASQLLLDEVIGVTGSVTNDGKLMLATKIIQPDVPNSVQRRTGSYGKAVL
ISDVHVGSSQFLEEAWLDFLDFLKGESDSEEMREIAAQVRYLVVAGDLVDGIGIYPDQEM
ELDILDVYEQYRKAAEYFREVPEHIHVIISPGNHDAVRQAEPQPALPERICADFPKNVTF
VGNPALVDLDGVRILIYHGRSIDDLVASVPGVSYQDPAGAVLEMLKRRHLAPTYGSRVSI
SPEKKDYFIIDPVPDIIHTGHVHTLGVQRYKNVLLVNSGTWQAQTEFQKRVNLMPVPARV
PVVDLADFDVKILAFD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatcgatattgtacgggcagttatagaggaaggataccagataagtccgcaa
gccgtagaattaatcaaattgagtaactctcctgaaagccttctaaaatatatcctttca
actattgatgattgtgttttcgttattgaacccgaacatatcgacctgaaggactttgaa
gcttctaaaatggtttccaggataatttctgaaacatctcccggggcagtttcccagatg
gcttcaggtaaaatttcctcttctcccttagaacccgtagactcgcacgtggtaaaaact
tttgaccctgctttggatgcccttgaggaaccaggattatcaagtattgaatcggatgtt
ttttcggcggttgaagtctcagactccaatccggagattaaacctgacattctttcttct
cagggttctgatcctgttcatgattctgttcacgattctgttcacgattctgttcatgat
tctgttcacgattctgttcacgatcctgttcatgattctgttcacgattctgttcacgat
tctgttcacgattctgttcatgattctgttcatgattctgctcatgattctgctcatggc
tctttttccaatcctgtttatccctctgcttcttcaagaagtgtagaaaaatcagcctcc
tctttttttggacatgcaggctctccttctccctccaaccgtgcttacggagcagattct
ctcttttcaaaccagggaaattctttccgttcgagttccagagatgaagaagtcaggtat
ctcccaggccgcaaccctgttaccgtgctttccgatattaccgggcattcgacctgtgtt
ggggagtatatgcagtttgtgcagtatttcagggacaggtacagcaggctctctgagatc
atccggggcaggattaatgcacgccctatagagagtttgaaaaggaggaattttcgccgt
ggatcagacggaaacactgaggagatatcgattataggaatggtttctgatatcagcagc
acaaccaatgggcacaaaatcttttctcttgaagactctacaggctctttttcagttctt
atccgaaatagcgacaaggaactctttgagctggcttcgcagcttcttctggacgaggtc
atcggggtaacaggctcggttactaacgacggaaagcttatgcttgccacaaagatcatc
cagccagatgtcccgaacagtgttcagcgcaggacaggtagctatgggaaagccgtactt
atctcggatgtgcacgtaggtagttcccagttcctggaagaggcctggctggacttcctg
gactttttgaaaggtgaatctgactccgaagaaatgcgggagattgcagctcaggtccgt
tatctcgttgttgcaggagacctcgtggacggtatagggatttatcctgaccaggaaatg
gaactggatattctggatgtctatgaacagtacagaaaagcagcagagtacttcagagaa
gttcctgaacacatacacgtgatcataagccctggaaaccatgacgctgtacgccaggca
gaaccacagccagccctgcctgagaggatctgcgcagattttccaaaaaatgtcactttt
gtaggcaacccggctcttgtggatcttgacggcgtcagaatccttatctaccacggcagg
tcgattgacgatctggtggcaagtgttcccggcgtctcttatcaggatcctgcaggtgca
gtccttgagatgcttaagcgcaggcaccttgctccaacgtacgggagcagggtttccata
tccccggagaaaaaagactactttataattgaccctgttccggatatcattcatacaggt
catgtccatacccttggagtccagcgatacaaaaatgttctactggttaattccggaact
tggcaggcccagactgagttccagaagcgtgtaaacctgatgcctgtgccagccagagtt
ccagttgtggatcttgcggatttcgatgtgaaaattctggcatttgactaa
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