Methanochimaera problematica: F1737_00480
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Entry
F1737_00480 CDS
T09667
Name
(GenBank) DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mefw
Methanochimaera problematica
Pathway
mefw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F1737_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mefw03400
]
F1737_00480
Enzymes [BR:
mefw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F1737_00480
DNA repair and recombination proteins [BR:
mefw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F1737_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
DUF2764
Motif
Other DBs
NCBI-ProteinID:
WOF15261
UniProt:
A0AA97FD42
LinkDB
All DBs
Position
98777..99613
Genome browser
AA seq
278 aa
AA seq
DB search
MKNRFELCDIPFSLDETLSCGQVFRWKKVNDFWEGVCHGRFIKVLQNKKFLEYSGCDEEF
LKYYFQLDLDLDLVLDSVCTDEHIEKAINERYGLRLVRQEPWECLLSYICAQNANIGFIS
RMLENMSAMCGEKIGTDEGSYSYPSAESLSQKCVTDIGCCSTGYRAPYICETSFAVMSDP
KWSKRIQNLGYPDARKEIMKYKGVGPKVADCILLFAFQKFESFPVDVWIRRIMNGFYGIG
NPEKPMSSSEYASISSFARDHFGEYAGYAQEYLFAGRK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaggtttgagctttgtgatattcccttcagccttgatgaaacactctcatgc
gggcaggttttccggtggaagaaggtaaatgacttctgggaaggagtctgccatggcaga
ttcattaaagttttgcagaacaaaaaattccttgaatattccggctgtgatgaggaattt
ttgaagtattactttcagctcgaccttgatcttgatcttgtacttgactccgtatgcacg
gatgaacatattgaaaaagcaataaacgagaggtacggtttaaggcttgtaaggcaggag
ccctgggaatgccttttgtcctacatctgtgcacagaatgcaaatattggctttataagc
agaatgcttgagaacatgtctgcgatgtgcggtgaaaaaatcgggacggatgagggttca
tattcgtacccctcagctgagtcactctcacaaaaatgcgtgactgatatcgggtgttgt
tccaccggataccgtgcaccatatatctgtgaaacttcgtttgccgttatgtctgatcca
aaatggtcaaagagaattcaaaatctcggatatcctgatgcaaggaaggagattatgaaa
tacaagggtgtcgggcctaaagtggcagactgcattcttctttttgcttttcaaaaattt
gagtccttcccggttgatgtgtggatcaggaggataatgaacgggttttacggtattgga
aatccggaaaaaccgatgtcttcgtccgaatatgcgtccatatcgtcttttgcaagggac
cattttggagaatatgcaggatatgctcaggaatatttatttgcagggcgtaaatag
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