Methanochimaera problematica: F1737_00560
Help
Entry
F1737_00560 CDS
T09667
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mefw
Methanochimaera problematica
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mefw03016
]
F1737_00560 (endA)
Enzymes [BR:
mefw01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
F1737_00560 (endA)
Transfer RNA biogenesis [BR:
mefw03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
F1737_00560 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
RE_TdeIII
TPR_24
Motif
Other DBs
NCBI-ProteinID:
WOF15274
UniProt:
A0AA97FBQ4
LinkDB
All DBs
Position
complement(118462..119460)
Genome browser
AA seq
332 aa
AA seq
DB search
MKAEYNGEQVLLGAEGKSLYDQGGYGRPDKNGLKLSPEEALYLLGRNKIEVKGHSFESLF
AAFTEESDFLRKFLVYRDIRERGYVIQSGPHDFRVFRRGEKPGTGRSQYLMRVLSERDLV
DFGKFAEEAQTARNMRKQFLLAVADDEDEITYYEIKTSDPQKGECEPELPKISGKIFGKS
VLISIPPESIFEEKLFGTRFDKERLMLSPVEAIYLIRKGFLELDEKISPEDYYKKIEDGD
HEFELKSKSYAHLRDLWHIPRTAYKFGHHFRVYSGSKKHSELLVHALSSDKTMPMSVISR
SVRLAHSVRKKMLFACVSKDMIKYIEFARIKL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctgaatacaacggagaacaggtccttttgggcgcggagggaaaaagcctctac
gaccagggaggatacggaaggcctgataaaaacgggctgaagctgtcacccgaagaagca
ctctatctcctcggaagaaacaaaatagaggtaaaaggccattcatttgagagtctcttt
gccgcatttacagaagaatccgattttctgcgaaagttccttgtctaccgtgacatccgt
gaaagagggtatgtcatccagtcggggccgcatgacttcagggttttcaggagaggtgaa
aaaccgggaacaggcagatcacagtatctcatgagagtactctcagagcgtgacctggtc
gattttggaaaattcgcagaagaggcacagaccgccagaaacatgagaaaacagtttcta
ctggcagtcgctgacgatgaagacgagatcacctattatgaaataaagaccagtgatccc
caaaagggagaatgcgagccggaacttccaaaaatctcaggaaaaatctttgggaaatcc
gtactgatatccatcccgcctgagagcatctttgaagagaaactttttggaacaagattt
gacaaagaacggctaatgctctcaccggtagaggcgatttacctgatcagaaagggattc
cttgaactcgatgagaaaatctcccccgaagactactacaaaaaaatcgaagacggcgat
catgaatttgagcttaaatcaaaatcatatgcgcacctgcgtgacctctggcacatacca
agaacggcctataaattcggccatcacttcagagtctactcagggtcaaaaaagcactca
gaactcctcgttcatgcattatcctcagataagacgatgccgatgagtgtcatctcacga
tcagtccgtctggcacacagtgtccgcaagaagatgctttttgcctgtgtaagcaaagat
atgataaagtacattgaatttgcgagaataaaattatag
DBGET
integrated database retrieval system
