Methanochimaera problematica: F1737_01910
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Entry
F1737_01910 CDS
T09667
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mefw
Methanochimaera problematica
Pathway
mefw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F1737_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mefw03021
]
F1737_01910
Transcription machinery [BR:
mefw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
F1737_01910
Prokaryotic type
Archaeal type
TFB
F1737_01910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_8
Cas12f1-like_TNB
Ribosomal_S27e
Lar_restr_allev
Zn_ribbon_SprT
HTH_AsnC-type
Zn_ribbon_IS1595
UPF0253
Zn_ribbon_LysW
DUF5817
FYDLN_acid
Trm112p
LUC7
Zn_ribbon_Elf1
Zn_ribbon_16
DZR
Zn_ribbon_double
Motif
Other DBs
NCBI-ProteinID:
WOF15525
UniProt:
A0AA97I1U1
LinkDB
All DBs
Position
complement(393456..394466)
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AA seq
336 aa
AA seq
DB search
MQEIEKLKQLQSQREALKKRSTENVEKLQKKKEDTTKTVCPECGSRQLIHDYERAELTCQ
NCGLVLEEEFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRAI
SSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDAV
DKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLKL
LPTSPIDYVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGG
ERRTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaattgaaaaactcaaacagctccagtcacaaagagaagcactcaaaaagaga
agcacagaaaatgtcgaaaaacttcaaaagaagaaggaagacacaaccaaaacagtctgc
ccggagtgtggaagccgtcagttaattcatgattacgaacgtgcagagcttacctgtcaa
aactgtggtcttgttcttgaagaagaatttatcgacagaggtcctgagtggcgtgcattc
gatcacgaccagcgtatgaaacgttcacgtgttggtgctcctatgacctttacaattcac
gacaaaggtctctcaacgatgatcgactggagaaaccgtgattcatacggtcgtgctatc
tcctccaaaaaccgtgcacagctataccgtctgcgtaaatggcagagaagaatccgtgta
tcaaatgcaacagagagaaaccttgcattcgctctttccgaacttgaccgcatggcatca
gctcttggtcttccaagaaatgttcgtgaaacagcagcagttgtctatcgtgatgctgtt
gacaaaaacctgattcgcggaagaagtatcgaaggtgttgcagccgctgctctctatgct
gcatgccgccagtgcagtgttccaagaacacttgacgaaattgccgaggtatcacgtgta
tcaagaaaagagattggaagaacatacaggttcatctcaagagaactcggattaaaactt
cttccgacatcaccaatcgactatgtgccgcgcttttgctcgggacttaatctcaaaggt
gaagttcagtcaagggctgttgaaatcctcagacaggccggagaaagagaacttacaagc
ggcagaggcccgacaggagttgccgccgccgcaatttatatatcatccattcttggcgga
gaacgccgtacacagcgtgaagtcgctgaagtggcaggcgttaccgaagttacgatcagg
aacagatataaggaacttgcagaaaaactagatatagagattattctctaa
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